| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2563 |
|---|
| Symbol | |
|---|
| ID | 4657440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2863612 |
|---|
| End bp | 2868447 |
|---|
| Gene Length | 4836 bp |
|---|
| Protein Length | 1611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639812544 |
|---|
| Product | YD repeat-containing protein |
|---|
| Protein accession | YP_959825 |
|---|
| Protein GI | 120555474 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3209] Rhs family protein |
|---|
| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGT CAAGGACGGC TCTTCGGGAG TCTCAACAGG CGTCTGATGG ATTGCCCGAC
ATCAATGCGA TCACCCGTGA GCTGCGGGAA TCGTTGGCCA AGACTTACGA AGATTGGCGC
GAAGGCTGGT TTTCATCGAT CTTCATGGGG CATGAACAGG TCCTTGAGGT GAATGGTGAA
GCCAGCCGGG AAAGTGTCAG TGATGATGAA GTTGTCTCGG TAACTGTAGC CCCGTGTGAG
GAGTTGCGGA CAATCAAAAT TGCTCACTTC CATGAGAACG TAAGCAAGAC GCCGATTCCC
TCCACGCGGT TTCAGATCCA GGAGAACACC GGCTGGATCT TCGATGACTG GGAGACCGTT
CACAGCGGCA CCACTGATGT GAATGGTATT GCGGAAGTTC CCGTTGCGCC GGGCAAAGAG
TATCGGGTGG TTCTGGCACC GGACGTTTCC CGTGCGGACA TGGATGCGCT GTACCAAACC
TACGAGAGCT TTATCGAGCG ATGTTGTTCA TTGCTTGAAA ACACCTGGAA TAACGGTGCT
CGTCAGGAGT GGGAAAGCTA TCTGAGCATG AGCTCAGCTG TTCAGGCTGC TGCTGTATAT
GCTCGGTTTC AGGAGGGGAT TGCGGACGGA TTCACCGCTG TTCTGGACGA CATCCGCCGT
ATCTACGATG TGATTTGTGG CTTGCTGGAT CACGATTTCA GCAATCTGCC TGACGATCTG
CGTGAGCAGA TGGAAAACCT TAAAAAGGCC GACGACGCCT ATCTCAAGGC GTGCCTTGTG
GCCAATGACG AGGTTTTCCT TTTCCTGGTG ATGTACACGG TCAGACAGTA CTTCCGTTTG
CTGTCTCCCA CACAGGTAGC TGAAGTGTCC GGGGAGCTGG TTGGCCAGAT TCTGTTCGAT
GTGGTGGTCG GCCTGATCAT TACCGGTGGC GCCGGGCTGG CAGCTAAATA CGGTGCTCGA
ATTGGCAGCA AAGCCGTGGC TGGTGCCATG AATGTGGCGG AGGATGCTCG CGTAACCAAG
AACATACTCG GCGAGTTTCT TGGCCAGTTC GCCAGGGAGT TCCAGGAATT CATGGAGGAC
ATCGGAACCA ACCATCGGAA GATTCAGTTT GCGGGTTCCG GTCATATTGA TTCATCCAAT
ACACAGTCCG GGGCGGGTGT CCGAAACCGT CACAATGCCT ATCAGGAAAT GGCGGACACT
GACGATGTCG CCAACATCCA GTCTTCGGGG CGTGATCACG GGGCTACGAG TGAGAGCGAG
GCTCAGCCAG TACGCGACGA ATCAACACCC TCCCAGACGG ATCAGGGCCG TGCCACCCAG
GATAACGAAT CCACCGAAAA TGTCGCCGAC CCAATCAGTA CCGTCACCGG CGAGGAAGTA
CTGGAACTGA CGGACGCGCG CCTGGTTGGT GCTCTGCCAT TCGAGTTCAA GCGGGTATAC
CGATCCGGTA GCAGCGACCG GCGCCTGGAT ATGGGCTATG GCTGGCGCCA TAGCCTGAAT
CACGCCCTGA CTTTCGACGA TGGTGGCATC ACCTGGCATG ACCACGAGGG CAAAAACACC
CGCCTTCCGG AATTGGAGAG CGCACCTGTC GGTATCAATT CCCGAGCTGC CATGGCGGCC
TGGCGGGACG GCGAAGAGGT TGTTGTCTGC GCGGGTGAAA AATCGCTTCG CTATCACTTT
CTCCGGTCGG GAAGCTCGGG CCAGCTTGTT CGGATATCCG ACCGATATGG CAACACGCTC
AAGGTTGGTT ACAACCTGCA CGGCCAGCTC GAGCGCCTGA CCAACGACTC GGGCAATGCG
CTGGCATTTG ATTTCGAGGG TAGCCGCCTC ACATCGGTTC GCCTGTTGCG CAGGGAGCTG
ACCGATACTG GCTACCAGTG GCAGTCACTG CGGACTGAGC GCAGCTACAC CTACGACGAC
AGCGATGACC TGATCGGCGC TGAGGACGCT GAGGGCGGCA TTGAGCGTTA TGGCTATGAA
AACCATATGC TTACTCACCG GCAACTTGCT GGCGGTTACA GCTTCTATCT CGCGTGGGAC
GAAAGCCTGC CAACCGGTCG CTGTGTTCAT CAGTGGGGGG ATAGTGCCCA GGTCGATACC
CGCTTTGAGT GGGATAATGA AAACCACACC TGTACCGTTA GCTACGTCGA CGGTAGCCGG
GAAATCTGGC GTTACGATGG CACTGCACAA CTGCAGGAGA AAGTAGACCC GGACGGCGCC
AAACACCTGA GTGAATACGA CGAACAGGGG CGGTTAAAAG TCTCCATCGA CCCCATGGGG
GCCCGGACAG AATACCAGTA CGACAAGAGT GGGCGACTCC AGAGCAAAAC CGGTCCGGAC
GGCCAGCCCA TTTTGTTTAC CTATCGAAAG GGGCGCATTG CTGAAATCCA TCGCAATGGC
CAGACCTGGA AGTTTGATTA TACCCGGCAC GGTGACCTGG CCTGCGAAGC CGATCCAAAA
GGACGAATTA CCCGGTACAC CTACAGCCCT CAGGGCCAGC TCACCCAGGT TGATCTGCCG
GACGGTCGCG CTCACAAGTG GGGCTGGAAC AGCCAGGGCC AGCTGATTGA GGAAACTACT
CCCACCGGGG CGTTCTACCA ATACCGCTAC GATGAGTTTG GCCAGCTTCT GGCCAAGAAG
GACGCCCGGG GTGCCATTAC CCGATACCGG TACGATGGCC TTGGACGAGT TACAGAGGAA
ATCCTCTCAG GCAACCGGTC TCGTCATTAT CAGTACAATG CGTATAACAA GGTCACCCGT
TTTGTGGACG AACAAGGGCG GGAAACCCGT TACGAGTATG ACAACAACCT TCACCTGCTC
ACTCGTCGCA TCAACCCGGA CGGCAGCGAG CTTTGCTACC GTTATGATCA CCATCGGTTC
CTGCTGACTC ACATCGAAAA TGAGCGGGGT GAAGCCTACC GCATCGACTA TTACCCGAAC
GGTTTGGTCA AACAGGAGAC TGCTTTTGAT GGTCATCGCA CCGCTTACCA GTATGACCTG
AATGGCCATC TGACGGAGAA GGCTGAGTAC GGCACCTCTA GTGAGGTCCT GCAAACCACC
ACCTATGAGC GGGATGAACT CGGCCAGTTG CTGAAGAAGA CACTACCCGA TGGCCGCGAG
ATTCAGTACG GCTATAACGC GGACGGCAAA CTGATCGGGG TTGATGATGG CCACTGGCCG
TTGGCATTCG AGTACGACGA ATTCGGTTTG TTGAAAACCG AACATCAGGG CTGGGCCAGC
CTCCGTTATC GTTATGATGA ATTTGATCGC CTGCACGAAA TGGTACTGCC GGACGGCCAG
GCGCTGGCTT ACCACTGGGA CGCAGCCGGG TTGTTGTCAG GCATCGACCT GAATGGCCAA
CCGCTGACCC GCCACAGAAT GGCGTCCACC GGCGAGGAAA TCGAACGGCA ACAGGGTGAT
CTGCTGAGCG CCTATGTTTA CGACGACGAA GGCCGCCTGA CCCAGCACCG GATTCATCAG
GGCCGCCTCA AGGATATCAG CGCCCAGCGC GACTACCAGT ATGATCCCAA CGGCAACCTC
AAAAGCATCC AGGACAGCCG CAAAGGGCTC AGACAATACG TCTACGACCC GATGGATCGT
TTGGTGGGCG TGCGGGGCGA TCTCTATGAA CAACTCATAC ACGACCCGGC TGGCAACCTC
CTGGAGCAAA ACCTGGGGGC TTCAAGCGGT CAATCTGCCA ATGTGCGCGG TAACCGGCTT
ACCATGCATG GTGACAGTCA CTACGAATAC GACGAATTCG GCAACCTGAT TGAGGAACGT
CGAGGCAAAG GTCAGAAACT GGTCACCCGG TATACCTACG ACTGCGAGCA CCGACTCACG
AGCGTCACCA CACCGGATGG CAGCACTTGG CACTACGAAT ACGACGCCTT CGGCCGCCGT
ATCGCCAAAA CCAACGGCCT GACACGAACC GAATTTCTCT GGCAGGGCGA CCGCCTCATT
GCTGAAGAAA CCGGGGATCA GTACCGCACC TATTTATACG AGCCTGACAG CTTCAAACCC
TTGGCGCTGG TAGATGGCCA AGGCCCGGAA GAAGCCGAAG TCTATTACTA CCACCTGGAC
CATTTGGGAA CGCCCCAGGA ACTGACCAAC CAGCAGGGCC GCCTCGTCTG GTCTGTCACC
TACCGCGCCT ACGGGAATGT GGTTCAGCAA CAAGTCGCAG AAATCGACAA CCCGCTCCGC
TTCCAGGGCC AGTACCACGA CCCGGAAACC GGCCTGCATT ACAACCGGCA TCGATATTAC
AACCCGAATA CCGGTCGATT CATTACGCCG GATCCGATTG GTCTTGCGGG TGGGTTGAAT
AATTATCAGT ATGTGCCTAA TCCTACGGGG TGGGTGGATC CGTTGGGGTT GGCTTCGCGC
CAGAAAAACG ATCCAGACTC AGCTGGTAGT CCGGAGGGGA TTGGTGGTGA CTCTGGTCCT
TTTGGTGGGG AACCCAAGAC TCCAGAAAGC GAACCGGTTG GATTGAGCGG AGGTAAGATT
CCTTGGGGTT CATGGAATGA TTACGACAAA GTAAATGTCA ATGGTCAAGA TTATGCGCAG
GTTGGAAATC GCCTTTATAG TGAACATGCA GTTAATAGAA TGCAGCCTGG GCGACGTCGG
CACTCATCTC GTGGCGGGAC CGGAGGCTTG CCCGAGATAT ATTTAGCCGG AACGCATGGC
GACTATGGCC GCGGTGTAGC ACCTCAGTAC GTTGAGGATG CGATATCTTC TGCCAAAGCA
GTCCAACAGC AGAATGGTAA CTTGTCATAT TTATCAGGTT CGCTCCAAGT CATAACGAAT
CAACAGGGAG CGGTCGTAAC AATAATTACG CACTAA
|
|---|
| Protein sequence | MIESRTALRE SQQASDGLPD INAITRELRE SLAKTYEDWR EGWFSSIFMG HEQVLEVNGE
ASRESVSDDE VVSVTVAPCE ELRTIKIAHF HENVSKTPIP STRFQIQENT GWIFDDWETV
HSGTTDVNGI AEVPVAPGKE YRVVLAPDVS RADMDALYQT YESFIERCCS LLENTWNNGA
RQEWESYLSM SSAVQAAAVY ARFQEGIADG FTAVLDDIRR IYDVICGLLD HDFSNLPDDL
REQMENLKKA DDAYLKACLV ANDEVFLFLV MYTVRQYFRL LSPTQVAEVS GELVGQILFD
VVVGLIITGG AGLAAKYGAR IGSKAVAGAM NVAEDARVTK NILGEFLGQF AREFQEFMED
IGTNHRKIQF AGSGHIDSSN TQSGAGVRNR HNAYQEMADT DDVANIQSSG RDHGATSESE
AQPVRDESTP SQTDQGRATQ DNESTENVAD PISTVTGEEV LELTDARLVG ALPFEFKRVY
RSGSSDRRLD MGYGWRHSLN HALTFDDGGI TWHDHEGKNT RLPELESAPV GINSRAAMAA
WRDGEEVVVC AGEKSLRYHF LRSGSSGQLV RISDRYGNTL KVGYNLHGQL ERLTNDSGNA
LAFDFEGSRL TSVRLLRREL TDTGYQWQSL RTERSYTYDD SDDLIGAEDA EGGIERYGYE
NHMLTHRQLA GGYSFYLAWD ESLPTGRCVH QWGDSAQVDT RFEWDNENHT CTVSYVDGSR
EIWRYDGTAQ LQEKVDPDGA KHLSEYDEQG RLKVSIDPMG ARTEYQYDKS GRLQSKTGPD
GQPILFTYRK GRIAEIHRNG QTWKFDYTRH GDLACEADPK GRITRYTYSP QGQLTQVDLP
DGRAHKWGWN SQGQLIEETT PTGAFYQYRY DEFGQLLAKK DARGAITRYR YDGLGRVTEE
ILSGNRSRHY QYNAYNKVTR FVDEQGRETR YEYDNNLHLL TRRINPDGSE LCYRYDHHRF
LLTHIENERG EAYRIDYYPN GLVKQETAFD GHRTAYQYDL NGHLTEKAEY GTSSEVLQTT
TYERDELGQL LKKTLPDGRE IQYGYNADGK LIGVDDGHWP LAFEYDEFGL LKTEHQGWAS
LRYRYDEFDR LHEMVLPDGQ ALAYHWDAAG LLSGIDLNGQ PLTRHRMAST GEEIERQQGD
LLSAYVYDDE GRLTQHRIHQ GRLKDISAQR DYQYDPNGNL KSIQDSRKGL RQYVYDPMDR
LVGVRGDLYE QLIHDPAGNL LEQNLGASSG QSANVRGNRL TMHGDSHYEY DEFGNLIEER
RGKGQKLVTR YTYDCEHRLT SVTTPDGSTW HYEYDAFGRR IAKTNGLTRT EFLWQGDRLI
AEETGDQYRT YLYEPDSFKP LALVDGQGPE EAEVYYYHLD HLGTPQELTN QQGRLVWSVT
YRAYGNVVQQ QVAEIDNPLR FQGQYHDPET GLHYNRHRYY NPNTGRFITP DPIGLAGGLN
NYQYVPNPTG WVDPLGLASR QKNDPDSAGS PEGIGGDSGP FGGEPKTPES EPVGLSGGKI
PWGSWNDYDK VNVNGQDYAQ VGNRLYSEHA VNRMQPGRRR HSSRGGTGGL PEIYLAGTHG
DYGRGVAPQY VEDAISSAKA VQQQNGNLSY LSGSLQVITN QQGAVVTIIT H
|
|---|
| |