Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_2554 |
Symbol | |
ID | 4654920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 2857400 |
End bp | 2858530 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639812535 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_959816 |
Protein GI | 120555465 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.115237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTCT CCCCCACCCT GGAACTTGCC AAGGACCTTA TCCGCCGCCA ATCCGTAACG CCGGACGACG CGGGCTGCCA GGAACTCATG ATGTCACGCC TGGCGCCGCT GGGTTTCAGT GGGGAAAACC TGCGCTTTGG CGAAACCGAC AACCTGTGGG CAAGAAAGGG CAACAATGGG CCGGTTCTGG CATTTGCCGG CCACACCGAC GTGGTACCCA CCGGCCCCGA GAAAAACTGG GCGCACCCGC CGTTTGACCC GATCATCAAG GACGGCTACC TGCACGGTCG GGGCGCAGCG GACATGAAGG GAAGCCTGGC GGCCTTCATC ACCGCCTGTG AACGATTTGT GGCCAACCAC CCGAATCATC GGGGCTCGAT TGCCCTGCTG ATCACCAGCG ATGAGGAAGG CCCGGCCCAG GATGGCACCG TAAAAGTGGT GGAAACCCTC GAAGCCCGCA ATGAGAAAAT GGACTGGTGC CTGATTGGCG AACCGTCCAG CACCCACCAG GTAGGGGATG TCATCAAGAA TGGCCGGCGC GGCTCCCTTC ACGGATACCT CACCGTTCGC GGCGTTCAGG GCCACGTGGC CTACCCGCAT CTGGCCGAGA ATGCCGTCCA CAACGTTGCA CCGGCACTGG ACGCGTTGGC CAAGGAATTC TGGGACAACG GCAACGACTT CTTCCCGCCT ACCACCTTCC AGATAACTCG TGTCGAGGCC GGCGTCGGCA GCAATATTGT GCCCGGGGAG TGCCTGGTGC ACTTCAACTT CCGTTACTGC ACCGAGAACA CCGCGGAAAG CCTGGAAGAG AGAGTGGTCG CTATCCTGGA TCGGCACAAC CTGAAATACG ATCTGCAATG GCACCTCAGT GGCCGGCCAT TCCTGACCGA CAAAGGCGCG CTGGTATCGG CCGCACAGAA TGCCATTCGA ACCGTGACTG GCCGTGAGAC AGAACTGTCT ACGTCCGGCG GCACCTCAGA CGGTCGCTTC ATTGCGCCCA CCGGTGCCCA GGTGGTCGAA CTTGGCCCGA TCAACGCCAC CATTCACAAG GTGGACGAGT GTGTGAAGGC TGAGGACCTG GACACACTAT CCGAGATCTA CGAACAGATT CTGGTCGAGC TGCTGGCCTA A
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Protein sequence | MSLSPTLELA KDLIRRQSVT PDDAGCQELM MSRLAPLGFS GENLRFGETD NLWARKGNNG PVLAFAGHTD VVPTGPEKNW AHPPFDPIIK DGYLHGRGAA DMKGSLAAFI TACERFVANH PNHRGSIALL ITSDEEGPAQ DGTVKVVETL EARNEKMDWC LIGEPSSTHQ VGDVIKNGRR GSLHGYLTVR GVQGHVAYPH LAENAVHNVA PALDALAKEF WDNGNDFFPP TTFQITRVEA GVGSNIVPGE CLVHFNFRYC TENTAESLEE RVVAILDRHN LKYDLQWHLS GRPFLTDKGA LVSAAQNAIR TVTGRETELS TSGGTSDGRF IAPTGAQVVE LGPINATIHK VDECVKAEDL DTLSEIYEQI LVELLA
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