Gene Maqu_2517 details

Gene Information

• Locus tag: Maqu_2517
• ID: 4653948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 2815738
• End bp: 2817582
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639812497
• Product: diguanylate cyclase with PAS/PAC sensor
• Protein accession: YP_959779
• Protein GI: 120555428
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.655073
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATCT TCGAGCAGAA ACGCCGCATT ATCACCACTG CCATCGTTGC AGTTGTTCTC 
ACTGGAATCA GTATTGCCGT GGTGGTCTCC ACCCCCCTGA TCAATCAGAT CCATACCCAG 
GCCGCAGACA CTGCGAGCCT GGTGGCCGAT GCCAAGGCCG AGAGCGTTCG GGCGGTATTC 
GATCAGCATC AGGATCTGGC GCGACAAACC GCCAGTCGCT CTGAGCTCGC GCGGGTTATG 
GTCGAATACA ACAGGGGAAA CCTGGCACTC GCTGACTTGC GGACCTTTTC TCGCCCCAGG 
CTTGACGATG CCGCAAAAAA CATCGACAAC CTTGCCGCCA TCGTCCGGTT TGATGCCAGT 
GGCGCCGAAG TTGTGCGCGT CGGGCCTCTG GACGATCCAC TTCCCGCTGA CCTGCCTATG 
CCATCCGGGC TTGATATCCA GTCCTACCCG GTAGGGGTAA ATAACGAAGC GAGGCCGTTA 
CTGCACGTCA TCGCTGCGAT ACGCGTGGAT GAACAGATCG TAGGCTATGA TCTTCTGCTG 
TTCGAACTCT CCTCACTGAT TCCCATCTTT CGTGTGGATG CGGACTCCAG TCTGTGCCTG 
CTTGATGTCG AGAGAACGCG GCGACTGATC TGGACCGAGG GCAGTCATCA GTTTCAATTG 
ACAACACCCA ATGGTTGCCT GGCCGAACAG GAAGGTATCG ATTACAAACC AGACCTCGAC 
TTTTTCCGGG CTTCGCTTCC AGACGGCACC CGTGTGCTGG CATTCATAAG ACTAGTGGAA 
GGATATGGCT GGGAAATCCA TATGAATGCC AGGACTTCCA GTGTGTTCGG TAAAGTGATC 
GAAGACATTG TTATCAGTGT TGTGCTGATA CTCATGCTCT CCGCCCTTGC CGGCACAATG 
GTCTGGCGTT CACTGATGCC GGTTGTGCAT GCACTGGTCA ACCAGGCCTC CCAGATTGCC 
CGGTCTACTG ATGAGCTTCG GCTGGCCCAG CAGGTCTTTA ACCACACCCA CGAAGCCATC 
GTGATTTGTG ACACCGGTTT ACAGGTTGTT CGTGCTAACC CGGCCTTCAA CGAGATTACC 
GGCGCAACAA CGAAGACACT TCGCAATACA AACCTGATGG CATTTATCGA CAGTGACAGA 
TGCAAGGAGA TAGACCGGGA AGAAATCCAC CGGCATCTTG TCGCGGAAAA TGCCTGGCAA 
GGCGAGGTCT GGCTGACCGG GCCCGATAAT GATCCGTTCC CCAACCTGCT GACGGTTTCG 
CCGGTACGCA ATGCCCGGGG ACAAATCCAG CAACTGATCC TGACCTTCAG CGATATTACG 
GCGCGGGTGC AGGCGGAAAA ACAGATGTTC CGGCTGGCAC ATTTCGACAA ACTCACTGGC 
CTGCCGAATC GAACGGCCCT GGAAACCCAC CTGGAACAAG CCATCGAGCA GGCCCGGCGC 
CAGCATCATC ACTTCGCCCT GATGTTCCTG GATCTGGACA AGTTCAAACC GGTAAACGAT 
ACCATGGGCC ACCAGGCTGG CGATGACCTG CTAAGGAATG TTGCAAGAAG GCTCAAGCAC 
AGTATTCGGG CCAATGATGT GGTGGGGCGC CGGGGTGGTG ATGAGTTCGT GATCATAACC 
GGGCCATTAA CCAACGATGC CGATGCCCAA CCCATTGCTC GCAAAATTAT CCAGGTGCTG 
AATGAGCCGT TTCACATTCA GGGCCAGACT GTGCACATTG GTGCCTCGGT GGGAATCGCC 
TTGTACCCGG ACAACGGCCA GACCGCTGAG CTTCTACTGG CCACCGCCGA CAAGGCCATG 
TATTCCGTGA AAACCAGCGG CAGGAACAAC CTGGCGTTTG CCTGA 

 

Protein sequence

MDIFEQKRRI ITTAIVAVVL TGISIAVVVS TPLINQIHTQ AADTASLVAD AKAESVRAVF 
DQHQDLARQT ASRSELARVM VEYNRGNLAL ADLRTFSRPR LDDAAKNIDN LAAIVRFDAS 
GAEVVRVGPL DDPLPADLPM PSGLDIQSYP VGVNNEARPL LHVIAAIRVD EQIVGYDLLL 
FELSSLIPIF RVDADSSLCL LDVERTRRLI WTEGSHQFQL TTPNGCLAEQ EGIDYKPDLD 
FFRASLPDGT RVLAFIRLVE GYGWEIHMNA RTSSVFGKVI EDIVISVVLI LMLSALAGTM 
VWRSLMPVVH ALVNQASQIA RSTDELRLAQ QVFNHTHEAI VICDTGLQVV RANPAFNEIT 
GATTKTLRNT NLMAFIDSDR CKEIDREEIH RHLVAENAWQ GEVWLTGPDN DPFPNLLTVS 
PVRNARGQIQ QLILTFSDIT ARVQAEKQMF RLAHFDKLTG LPNRTALETH LEQAIEQARR 
QHHHFALMFL DLDKFKPVND TMGHQAGDDL LRNVARRLKH SIRANDVVGR RGGDEFVIIT 
GPLTNDADAQ PIARKIIQVL NEPFHIQGQT VHIGASVGIA LYPDNGQTAE LLLATADKAM 
YSVKTSGRNN LAFA