| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2490 |
|---|
| Symbol | |
|---|
| ID | 4655689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 2784554 |
|---|
| End bp | 2786704 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639812469 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_959752 |
|---|
| Protein GI | 120555401 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.305036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCA TCCAATACGA CCTGGGTTCA GACCAGATTC TGACCCTGAC CATCGACATG
CCGGGCCAGT CTGCGAACAC CATGAACGGC GAGTTTCGAA CTGCACTAAC CGAAACCGTC
AACAAGGTCA AAAGCGACCT GGATAATGTC AAAGGCATTA TCATTGCCTC CGCCAAGAAA
AGCTTCTTTG CCGGCGGCGA CCTGAATGAG CTGTACACAG TGACCCGCGA ACAGGCCAAA
GAGTTTGAAG ACATGGTCAA CGGCCTGAAG GCCGATATGC GTACGCTGGA AACCTGTGGC
AAACCTGTGG TGGCTGCCAT CAACGGCACC GCTCTGGGTG GTGGCCTGGA ACTCGCCCTG
GCCTGCCATC ATCGCGTTGC CATTGATGAT GACCGGACCC AACTGGGCTT GCCGGAAGTC
ACCCTGGGCC TGCTGCCCGG CGGTGGCGGC ACCCAGCGAC TGCCCCGGAT GATTGGCCTG
GAAGCCGCCT TCCCGTTCCT GATGGAGGGT AAGAAGGTAA ATCCAAAAGC CGCTCTGAAG
GCCGGTATCG TGGATGAGCT GGCCAGCTCA CCGGAAGACA TGATCGCCAA GGCCCGGGCC
TTCATCGAAG CCAATCCCAA GTGCCAGCAA CCCTGGGATC AGAAAGGCTT CCGCTTCCCC
GGCGGAGCTC CGCATCATCC GGCCATGGCC CAGAAACTGG CTATTGCACC GGCCATGCTC
AAACAGAAGA CCAAAGGCTG CTATCCGGCA CCGGAACGGA TTCTGGCAGC AGCGGTGGAA
GGCGCCCAGG TGGATTTCGA CAATGGCAGC CTGATTGAAA CCCGTTACTT TGCCGAGCTG
GCCACCGGCC AGGTGGCCAA GAACATGACG GGCACCTTCT GGTTCCAGCT CAACGCCATC
AAGGCCGGCG GCAGTCGCCC GGATGGCGTA GAAAAGGAAA GCTTCAAGAA AGTCGGGGTA
CTGGGTGCAG GCATGATGGG CGCCGGTATC GCCTACTCCA CTGCCAGCCG CGGCATTGAG
GTGGTGCTGA AGGATGTCTC GGTTGAAAAC GCCGAGAAAG GCAAACGCTA TTCCGAAAAT
CTCCTGGCGA AGAAAGTCAG TCGCGGCCGC ATGACCGAAG CCCAGAAAGA CGAAGTGTTG
GCCCGCATCA ACGCCACCGC CTCTGCCGAC GACCTGGAAG GTTGCGACCT GATCATCGAG
GCAGTCTTTG AAGACAGCGA TCTGAAGGCA AAGGTTACCC GGGAATCCGA GCCGAAAATG
GTCGCTAACG GCATCTTTGC CTCCAACACC TCAACCATCC CCATCACCCA GTTGGCCCAG
GCCTCGGCCA AGCCGGACAA CTTTATCGGC CTGCACTTCT TCTCCCCGGT GGACAAGATG
CAACTGGTGG AAATCATCGT CGGCGAGAAA ACCTCCGATG ACACCCTGGC CCGGGCGTTC
GATTACGTGC AGCAGATAGG CAAGATTCCC ATTGTGGTGA ACGACAGCCG CGGCTTCTTT
ACCTCTCGGG TATTTGGCAC CTTCGTGAAC GAAGGTATCA GCATGCTGGC CGAGGGCATT
CACCCCTCAA GCATCGAGAA TGCCGGACTG CTGGCCGGCA TGCCGGTCGG GCCGCTGGCC
ATCTCCGACG AAGTCAGCAT GACCCTGATG CAGCACATCC GCGCCCAAAG CAAGAAAGAC
ACGGAAGCCG CCGGCGGTAC CTGGCAGCCG CATCCGGCCG AAGCCGTCAT CGATGCCATG
GTGGATACTC ACGGACGCAA GGGCAAAGCC GCCGGTGCCG GTTTCTACGA GTATCCGGAG
AAGGGCAAAA AATACCTGTG GCCGGAACTG GAGAACCTGT TCGTGGACCA GGACAAGGCA
CGCCGTGTGA AGCTGCAGGA TCTGAAAGAT CGCATCCTGT TCATGCAGGC CATCGAGACC
ATCCGCTGTC TTGAGGAGGG TGTGCTGAGA ACCGTGGAAG ACGCCAACAT TGGCAGCATC
TTCGGTATTG GCTACGCGCC CTGGACCGGC GGTGCCATCC AGTTCGTCAA CCAGTATGGC
GTTCGGGCCT TTGCGGAGCG GGCGCAGCAG CTGGCAGACC AGTACGGTGA GCGATTCACG
CCGCCATCGC TGTTGCTTCA GAAAGCCGAA CGCAACGAAA CCTTTAGCTG A
|
|---|
| Protein sequence | MSAIQYDLGS DQILTLTIDM PGQSANTMNG EFRTALTETV NKVKSDLDNV KGIIIASAKK
SFFAGGDLNE LYTVTREQAK EFEDMVNGLK ADMRTLETCG KPVVAAINGT ALGGGLELAL
ACHHRVAIDD DRTQLGLPEV TLGLLPGGGG TQRLPRMIGL EAAFPFLMEG KKVNPKAALK
AGIVDELASS PEDMIAKARA FIEANPKCQQ PWDQKGFRFP GGAPHHPAMA QKLAIAPAML
KQKTKGCYPA PERILAAAVE GAQVDFDNGS LIETRYFAEL ATGQVAKNMT GTFWFQLNAI
KAGGSRPDGV EKESFKKVGV LGAGMMGAGI AYSTASRGIE VVLKDVSVEN AEKGKRYSEN
LLAKKVSRGR MTEAQKDEVL ARINATASAD DLEGCDLIIE AVFEDSDLKA KVTRESEPKM
VANGIFASNT STIPITQLAQ ASAKPDNFIG LHFFSPVDKM QLVEIIVGEK TSDDTLARAF
DYVQQIGKIP IVVNDSRGFF TSRVFGTFVN EGISMLAEGI HPSSIENAGL LAGMPVGPLA
ISDEVSMTLM QHIRAQSKKD TEAAGGTWQP HPAEAVIDAM VDTHGRKGKA AGAGFYEYPE
KGKKYLWPEL ENLFVDQDKA RRVKLQDLKD RILFMQAIET IRCLEEGVLR TVEDANIGSI
FGIGYAPWTG GAIQFVNQYG VRAFAERAQQ LADQYGERFT PPSLLLQKAE RNETFS
|
|---|
| |