| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2477 |
|---|
| Symbol | |
|---|
| ID | 4655941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2762478 |
|---|
| End bp | 2764028 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639812451 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_959739 |
|---|
| Protein GI | 120555388 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTA GTGAACACCT GGTCATTTTT GATACCACTC TGCGTGATGG CGAGCAAAGT
CCGGGCGCCA CCATGAACAA GGCGGAAAAA CTCCGCATTG CCAAGGCGCT CGAGAAGCTT
CGCGTAGACG TTATCGAGGC GGGGTTTGCC ATTGCCAGCC AGGGCGACTT TGATGCAGTC
AAGGCTATTG CCGAGAACAT CAAAGAATCC ACTGTCTGCA GTCTGGCTCG TGCGTTGGAC
AAGGATATCG ACAGGGCCGC TGAAGCGATC CGCCCTGCCG AGCGCTCCCG TATCCATACC
TTTATTGCCA CCTCGCCCAT CCATATGAAG CATAAACTTC AGATGGAGCC AGATGAGGTG
GTCGAGCAAG CCGTGCGCGC TGTCAAGCGG GCGCGTAGCC ACGTTGATGA CGTCGAGTTC
TCCTGTGAAG ACGCCGGGCG GTCAGAGCTG GATTTTCTTT GTCGCATCAT TGAAGCCGCT
ATCGATGCCG GCGCCCGTAC CATCAACATC CCTGATACCG TGGGCTATGC CATTCCTGAA
CAGTTTGGTG AGACCATCCG TCAGTTACTG AACCGTATCC CGAATGCCGA CAAGGCTGTT
TTTTCAGTCC ATTGCCATAA CGACCTGGGG CTTGCGGTAG CCAACTCGCT GGCTGCGGTT
ACCCACGGTG CCCGTCAGGT CGAATGTACT ATCAATGGTC TGGGCGAACG GGCAGGTAAC
GCAGCGCTGG AAGAAATAGT CATGGCGGTT CGTACCCGCC AGGATCTCTT CAATATTGAT
ACCCGCATAG ACACCCAGCA TATCGTCCCG GCATCACGTC TGGTGTCCAC CATTACCGGG
TTTCCTGTTC AACCCAACAA GGCGATCGTC GGTGCCAATG CTTTTGCCCA TGAGTCCGGC
ATCCATCAGG ATGGCGTGCT CAAACATCGC GAAACCTACG AGATCATGCG GGCACAGGAC
GTAGGCTGGC ATACCAATAG CCTGGTTTTA GGTAAGCATT CCGGCCGCAA TGCCTTCCGT
ACGAGACTAC TGGAGCTTGG TATCCAGTTT GAAACCGAAG GGGAGTTGAA TGAGGCCTTC
ACCCGCTTCA AGGCACTGGC CGACCTCAAG CATGAGATCT TTGATGAAGA TCTGCAGGCG
ATTGCCAGCG ATACCAAGCA AAAGGAAGAA GAAGGCCGCT TCGGTCTGGT CTGCATGCAG
GTCTGTTCTG AAACCGGCGT TGTGCCCAAG GCGCATCTCA CCATGACCGT GGACGGTAAG
GAACACACGG TAGAGGCTGA GGGCAGCGGT CCTGTAGACG CAACTTTCAA GGCCATTGAA
TCTCTGGTGG ATTCCGGGTG TAACCTGCAA CTGTATTCGG TCAACAATAT TACCAGCGGC
ACTGATGCTC AGGGGGAAGT CACCGTTCGT CTTGAGCGGG GCGGCCGTAT TGTGAACGGC
GTTGGATCGG ATACCGACAT CATTATTGCG TCGGCGAAGG CCTACATTGA AGCTCTGAAC
CTGATTTCCA GTGGCGGTAT TCGCCAACAT CCCCAGGTGG CTGATGTTTA A
|
|---|
| Protein sequence | MAASEHLVIF DTTLRDGEQS PGATMNKAEK LRIAKALEKL RVDVIEAGFA IASQGDFDAV
KAIAENIKES TVCSLARALD KDIDRAAEAI RPAERSRIHT FIATSPIHMK HKLQMEPDEV
VEQAVRAVKR ARSHVDDVEF SCEDAGRSEL DFLCRIIEAA IDAGARTINI PDTVGYAIPE
QFGETIRQLL NRIPNADKAV FSVHCHNDLG LAVANSLAAV THGARQVECT INGLGERAGN
AALEEIVMAV RTRQDLFNID TRIDTQHIVP ASRLVSTITG FPVQPNKAIV GANAFAHESG
IHQDGVLKHR ETYEIMRAQD VGWHTNSLVL GKHSGRNAFR TRLLELGIQF ETEGELNEAF
TRFKALADLK HEIFDEDLQA IASDTKQKEE EGRFGLVCMQ VCSETGVVPK AHLTMTVDGK
EHTVEAEGSG PVDATFKAIE SLVDSGCNLQ LYSVNNITSG TDAQGEVTVR LERGGRIVNG
VGSDTDIIIA SAKAYIEALN LISSGGIRQH PQVADV
|
|---|
| |