| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2388 |
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| Symbol | |
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| ID | 4656663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2665264 |
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| End bp | 2667711 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639812362 |
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| Product | ribonuclease R |
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| Protein accession | YP_959651 |
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| Protein GI | 120555300 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTCCA GGAAGAACAA ACAAAGTGAC CCTCATGCCC AGCGTGAGGC CCAGAAATAT
GACAACCCCA TCCAGAGTCG GGAGTACATT CTCCAACATC TGAAAGAGCG GGGCGCGCCG
GCCACGCACG AGACCCTGTG TCAGGAGCTC GGGCAGACGT CTGCGGAAGG AATTGAAGCG
TTGCGCCGTC GTCTGATTGC GATGTGCCGT GATGGACAGT TGATCTGTAA CCGCCGTGAT
GCGTTCCTGC CGATCGAGGA AGCGGATCTG GTCACCGGGC GTGTGGTTGG ACATCGTGAT
GGTTTCGGGT TTCTGATCCC CGATGACGGT GGCTCCGACC TGTTTCTGAC TGCCCGGCAG
ATGCGCCAGG TATTCCACGG TGACCGGGTA GCCGCCCGGG TGGATCAGGT GGATGATCGC
GGGCGCCGGG AAGGCAAGAT TGTAGAAGTG CTGGAGCATC GCACCTCCCA GATCGTCGGT
CGCTTTTTTA AAGAAAGCGG CATCGCCTTC GTGGTGCCAG AGAACGCCAG AATCAATCAC
GAGATACTGG TTCCGGATGA GCAGGCGGGT AAGGCGGTTC ACGGCCAGTA TGTTGTGGTG
GAAATCATTC GTCAGCCGAC GATTCGAACC CAGCCCACCG GCCAGGTTAT CGAGATTCTG
GGCGAGCACA TGGCGCCGGG AATGGAAATC GATGTGGCCA TTCGTTCCTA CGAAATCCCG
CATAGCTGGC CGCCCGCGGT CGGTGAACAG GCCGCCTCGA TTCCCGCGGA AGTGGCAGAG
AAAGACAAGG CAAACCGGGT GGATATCCGC AACATGCGCC TGGTGACCAT CGACGACGAG
AGCGCTCGTG ACTTCGATGA TGCCATTTAC TGCGAGCCTC GTCCCCGTGG TGGCTATCGG
TTGGTGGTGG CCATCGCTGA TGTATCCCAT TACGTCCGCC CGGGGTCGCC ACTGGATGAA
GAGGCCATTC AGCGCGGTAA CTCGGTGTAT TTCCCGGACC ACGTGGTGCC CATGCTGCCG
GAGAAGCTCT CCAATGGCCT GTGTTCCCTG AACCCGGATG TCGACCGTCT GTGCATGGTG
GCCGACATGA CCATCAGTGC CGCCGGTAAC ATCAGCGGCT ACACCTTCTA TCAGGCCGTA
ATGCGCAGCC ATGCCCGGCT GACCTACAAC AAGGTCAGTG CCATGCTGGA GCATCCGGAT
ACGGAGCAGG GCTACAAACT CAGCGCCCAC TATGCGGATC TGCTGCCGCA TCTGCACAAC
CTGTATGACC TCTACAAGTT GTTGCGAAAG GCTCGCACCG AGCGTGGGGC CATTGATTTC
GAGACCACGG AAACCAAGAT TGTTTTCGAT GCCCAGCGCA AGATTGAGGA AATTGTTCCG
GTGCACCGGA ACGATGCCCA CAAGATTGTC GAAGAGTGCA TGCTGTGCGC CAATGTGGCG
ACGGCCCGCT TCCTCAAGAA GCACAAGATT CCGGCGCTTT ACCGGGTGCA CGACGGGCCT
TCGGAAGAGC GTCTGAGCAA TCTGCGCCTG TTCCTGGGTG AGCTGGGGTT GCAGCTGGGC
GGCGGCGACA AGCCGTCATC GGCAGATTAC CAGGCCTTGC TGGGTCAGGT GGCCGACCGC
CCGGATGCCA ATGTCATCCA GATGGTGATG CTGCGCTCTC TGAGCCAGGC GGTGTACAGT
CCTGAGGAAG CCGGGCATTT TGGTCTTGGC TTCGCCAGTT ATACCCACTT CACGTCGCCA
ATTCGACGTT ACCCGGACCT GATTGTGCAT CGGGCCATCA AGTCCCGGAT CCATAATCCC
GAGGCAACCA AAGATCTGGT GTCCCCGAAG GTGCACGATC CCGAATTGGC TGAGTATCCC
TACGATTATG CCCGTATGGA GCAGTTGGGT GAGCATTGCT CCATGACCGA ACGCCGGGCC
GACGATGCCA CACGGGATGT CATGGCCTGG CTCAAGTGCG AGTTCCTGCG CGATCACGTG
GGCGAGGAGT ACGATGGCAT TATCGGCGCG GTGGTGCCGT TTGGCTTCTT TGTTGAGTTG
TCCGATATCT ACATCGAAGG TCTGGTACAC GTCTCCACGC TCAGTGGTGA CTACTTCCAT
CACGATGCCG TCAAGCATCG TCTGATTGGT GAGCGCACGG CGGTCAGCTT CCGTCTGGGT
GACGAAGTGC GTGTCCGCGT GGTGCGTGTC GATCTGGAAG ACCGAAAAAT CGATCTTGAG
CTGGTAAGTA CCCCCAGGCG CCGGAAGGCA GACCGCGATG CGCTGGAAGT GTCCAAGCGC
GAGCCGCGGG GCAAAGGCAA GGGTGATCGC TCCGGTAAAG GGCGAAAAAC CGGTAAGCCG
GCCAGCGCCA AGGAAAAGCT GGCCGCAGAG GCTGCCCGGG AGGCCCGGTC TAAATCGGCC
AAAGGTAAAC CGTCAGGCTC GGGCCGTAAG CGCAAGAGTC GCAAATAA
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| Protein sequence | MVSRKNKQSD PHAQREAQKY DNPIQSREYI LQHLKERGAP ATHETLCQEL GQTSAEGIEA
LRRRLIAMCR DGQLICNRRD AFLPIEEADL VTGRVVGHRD GFGFLIPDDG GSDLFLTARQ
MRQVFHGDRV AARVDQVDDR GRREGKIVEV LEHRTSQIVG RFFKESGIAF VVPENARINH
EILVPDEQAG KAVHGQYVVV EIIRQPTIRT QPTGQVIEIL GEHMAPGMEI DVAIRSYEIP
HSWPPAVGEQ AASIPAEVAE KDKANRVDIR NMRLVTIDDE SARDFDDAIY CEPRPRGGYR
LVVAIADVSH YVRPGSPLDE EAIQRGNSVY FPDHVVPMLP EKLSNGLCSL NPDVDRLCMV
ADMTISAAGN ISGYTFYQAV MRSHARLTYN KVSAMLEHPD TEQGYKLSAH YADLLPHLHN
LYDLYKLLRK ARTERGAIDF ETTETKIVFD AQRKIEEIVP VHRNDAHKIV EECMLCANVA
TARFLKKHKI PALYRVHDGP SEERLSNLRL FLGELGLQLG GGDKPSSADY QALLGQVADR
PDANVIQMVM LRSLSQAVYS PEEAGHFGLG FASYTHFTSP IRRYPDLIVH RAIKSRIHNP
EATKDLVSPK VHDPELAEYP YDYARMEQLG EHCSMTERRA DDATRDVMAW LKCEFLRDHV
GEEYDGIIGA VVPFGFFVEL SDIYIEGLVH VSTLSGDYFH HDAVKHRLIG ERTAVSFRLG
DEVRVRVVRV DLEDRKIDLE LVSTPRRRKA DRDALEVSKR EPRGKGKGDR SGKGRKTGKP
ASAKEKLAAE AAREARSKSA KGKPSGSGRK RKSRK
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