Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_2263 |
Symbol | |
ID | 4653850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 2535756 |
End bp | 2536373 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639812237 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_959528 |
Protein GI | 120555177 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.228052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCTG AAAATGACTG GAAACCCGGA GAGCAGTCCG ACAGCCAGAC GGATCTGCAG TTGGTTCGCA AGGTCCGGAA CGGAGATCGT GCGGCCTTCG ATCTGCTGGT GGTGAAATAC CAGTCCAGGG TCGCGTCTAT TATCAGCCGC TATGTCTACG ACAGTCAGGA AGTCATGGAT CTGACTCAGG AAACCTTTGT CAAAGCCTTC CGCGCGATTG ATCGCTTTCG CGGTGACAGC GCGTTTTACA CCTGGTTGTA CCGGATTGCC GTAAACACCG CCAAGAATTT CCTTGAGGCC CGCGGCAGGC GGCCCCAGGG ATCGGCGGAT GTCACCGATG CGGAAAACTT TGATGATGGC GGCCGACTGC GTGACCCGGC CTCGCCGGAG CGGTTGCTGC AGAGGGAGCA GTTGCAGAAA GCTCTTGCGG AAGCCATTGC CAGCCTGCCG GAGGAACTGC GGTCGGCGTT CCTGCTCAGG GAATACGATG GCCTGAGTTA TGAAGATATT GCCCGGATAC TGGAGTGCCC CATAGGTACC GTGCGCTCAA GAATTTTCCG GGCGCGGGAC TCGGTGGATC GCCACCTTGG CCCGCTCCTT GATCAGTCAG TAACGTGA
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Protein sequence | MTPENDWKPG EQSDSQTDLQ LVRKVRNGDR AAFDLLVVKY QSRVASIISR YVYDSQEVMD LTQETFVKAF RAIDRFRGDS AFYTWLYRIA VNTAKNFLEA RGRRPQGSAD VTDAENFDDG GRLRDPASPE RLLQREQLQK ALAEAIASLP EELRSAFLLR EYDGLSYEDI ARILECPIGT VRSRIFRARD SVDRHLGPLL DQSVT
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