Gene Maqu_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_2263 
Symbol 
ID4653850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp2535756 
End bp2536373 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content58% 
IMG OID639812237 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_959528 
Protein GI120555177 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.228052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCTG AAAATGACTG GAAACCCGGA GAGCAGTCCG ACAGCCAGAC GGATCTGCAG 
TTGGTTCGCA AGGTCCGGAA CGGAGATCGT GCGGCCTTCG ATCTGCTGGT GGTGAAATAC
CAGTCCAGGG TCGCGTCTAT TATCAGCCGC TATGTCTACG ACAGTCAGGA AGTCATGGAT
CTGACTCAGG AAACCTTTGT CAAAGCCTTC CGCGCGATTG ATCGCTTTCG CGGTGACAGC
GCGTTTTACA CCTGGTTGTA CCGGATTGCC GTAAACACCG CCAAGAATTT CCTTGAGGCC
CGCGGCAGGC GGCCCCAGGG ATCGGCGGAT GTCACCGATG CGGAAAACTT TGATGATGGC
GGCCGACTGC GTGACCCGGC CTCGCCGGAG CGGTTGCTGC AGAGGGAGCA GTTGCAGAAA
GCTCTTGCGG AAGCCATTGC CAGCCTGCCG GAGGAACTGC GGTCGGCGTT CCTGCTCAGG
GAATACGATG GCCTGAGTTA TGAAGATATT GCCCGGATAC TGGAGTGCCC CATAGGTACC
GTGCGCTCAA GAATTTTCCG GGCGCGGGAC TCGGTGGATC GCCACCTTGG CCCGCTCCTT
GATCAGTCAG TAACGTGA
 
Protein sequence
MTPENDWKPG EQSDSQTDLQ LVRKVRNGDR AAFDLLVVKY QSRVASIISR YVYDSQEVMD 
LTQETFVKAF RAIDRFRGDS AFYTWLYRIA VNTAKNFLEA RGRRPQGSAD VTDAENFDDG
GRLRDPASPE RLLQREQLQK ALAEAIASLP EELRSAFLLR EYDGLSYEDI ARILECPIGT
VRSRIFRARD SVDRHLGPLL DQSVT