| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2177 |
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| Symbol | |
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| ID | 4656912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2437748 |
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| End bp | 2438980 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639812152 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_959443 |
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| Protein GI | 120555092 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAGCAG ATAACCCGGC GATTGCCCGG ATATACCGGG ATCAGTCCCG GCAGGTAATG
GCTACGCTTA TTCGCCTGCT GGGCAGTTTT GAGCTGGCTG AGGAAGCCAT GCAAGAGGCC
TTTGCGGCGG CGGTCCGGCA ATGGCCAGGC GAAGGTATTC CGGAAAACCC GGTGGCTTGG
CTTATCCGAA CCGGCCGCCG CAAAGGCATT GATCACATTC GCCGTGGACA GACCGCCCGA
CGATACGCTC ACCTGGTAGG CGAGCAGGAA GAAGGCGCAG ACTGCGATGA TTGGCAGGCC
ATTGAGGACG ACCAGTTACG ACTGCTTTTC GTCTGTTGTC ACCCTGCGTT GTCCCTGGAT
GCCCGTGTTG CTCTGACTCT CAGGGAGATG TGCGGTTTGA CCACCGAGCA GGTTGCCCGA
GCCCTGTTGC AGAAGCCGAC GACTCTGGCT CAGCGAATTG TTCGTGCCAA GAAAAAAATT
CGAGAGGCCC GGATTCCCTA CGAGGTTCCA GAGCGCCGGC AACTACCAGA ACGCTTGCCC
GGTGTGTTGC GAGTGATTTA TCTGGTATTC AATGAAGGTT ATTCCCGCAG TGATGGTGAG
TCGGTCACCG ACATGAGCCT GTCGGATGAA GCCATTCGGC TCACTGAGAA TCTGACTCGT
TTGTTGCCCG AAGGGGAAGT GTTTGGCTTG CTGGCGCTCA TGCTGCTGCA CGATTCCCGC
CGCGGTGCCC GGGATGACGA GAATGGCAAT CTGGTTACGC TGGAGGAGCA GGATCGTTCT
CTGTGGAATC GGAGCCAGAT TGACCGGGGG CTGAAGTGGC TAGAACAGGC ACTGACGCTA
ACGCCAGCTT CGCCATACAC GTTGCAGGCT TCCATAGCGG CAGTGCATGC CCGCGCTGAC
GATTCCAATG AAACAGATTG GCGCCGCATT TCGCGACTTT ACGCGGCTCT ATATCGCCAG
CACCCGTCAC CGGTTGTCGC CTTGAACCAC GCGGTTGCCG TAGCCATGTG TGATGGCCCG
GAGGCCGGTT TGGCTCTGTT GGATGGGCTG GTGGGCAACA AGGAAATTCT GTCCTATCAC
CTGTTTCACG CCGCCCGGGC CGATCTCCTG CGCAGGGCAG GGGATGTGGA TGCTTCTGCT
CACGCCTACC AGCGTGCGTT AGCAATGGCG ACACAAACCC CGGAACGGCG CTTTCTGGAA
CGCAGGCTTC GGGAATTGAG TTTTCCCGTG TAA
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| Protein sequence | MPADNPAIAR IYRDQSRQVM ATLIRLLGSF ELAEEAMQEA FAAAVRQWPG EGIPENPVAW
LIRTGRRKGI DHIRRGQTAR RYAHLVGEQE EGADCDDWQA IEDDQLRLLF VCCHPALSLD
ARVALTLREM CGLTTEQVAR ALLQKPTTLA QRIVRAKKKI REARIPYEVP ERRQLPERLP
GVLRVIYLVF NEGYSRSDGE SVTDMSLSDE AIRLTENLTR LLPEGEVFGL LALMLLHDSR
RGARDDENGN LVTLEEQDRS LWNRSQIDRG LKWLEQALTL TPASPYTLQA SIAAVHARAD
DSNETDWRRI SRLYAALYRQ HPSPVVALNH AVAVAMCDGP EAGLALLDGL VGNKEILSYH
LFHAARADLL RRAGDVDASA HAYQRALAMA TQTPERRFLE RRLRELSFPV
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