| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2110 |
|---|
| Symbol | |
|---|
| ID | 4653983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2364138 |
|---|
| End bp | 2364875 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639812086 |
|---|
| Product | pseudouridine synthase |
|---|
| Protein accession | YP_959377 |
|---|
| Protein GI | 120555026 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACC CTCTCACTGA AATTTATCGG GACGACTGGC TGCTGGCCGT GCACAAGCCA
GCCGGATTGC TGGTGCATCG CAGTCCCATC GACAAGCACG AAACCGAGTT TGCCCTGCAG
TATGCCCGGG CCATGAATGG CGGTGAGCAT GTATACCCCG TGCATCGGCT GGATCGTCCC
ACCTCGGGCG TTTTGTTGTT TGCCCGGGAT CCGGAGACCG CGCGTGCGCT TGGTCTGGCG
ATGATGGCCG GGGCGGTGAG CAAAACCTAT CTGGCGATGG TCAGGGGCTG GGCACCGGAG
CAGGGGGTGA TCGACCACCC GCTCCGGGAA GAGCCGGAAG ACCGACGTCT TAAAGGTCAG
GAGCAGCCGG TTCGTGAGGC GCTCACCCGG TATCGCCGGC TGGCGACGAC CGAATTGCCG
GTGGCAATTG AGCGTTACCC CACGAGTCGA TACAGCCTGG TCGAACTGAA GCCCGAAACC
GGCCGGAAAC ATCAGCTTCG CCGGCATATG AAACACATCA ACCACCCGAT CATTGGCGAC
GCCAACCACG GTCGGGGCAG GCACAACCGG TATTTCGCCG AGCGTTTCGG GCAGGGGCGC
CTGATGCTGG CGGCTACGGA GTTGCGACTG AGACATCCGG TAACCGATGA ACCTCTGTGT
CTGAAGGCCC ACCCTGAGAG CAGTTTCTTG CAGGTTTTGG CAATTTTTGA AGGGAACGAC
CTCCCACTGC CGCAATAG
|
|---|
| Protein sequence | MLNPLTEIYR DDWLLAVHKP AGLLVHRSPI DKHETEFALQ YARAMNGGEH VYPVHRLDRP
TSGVLLFARD PETARALGLA MMAGAVSKTY LAMVRGWAPE QGVIDHPLRE EPEDRRLKGQ
EQPVREALTR YRRLATTELP VAIERYPTSR YSLVELKPET GRKHQLRRHM KHINHPIIGD
ANHGRGRHNR YFAERFGQGR LMLAATELRL RHPVTDEPLC LKAHPESSFL QVLAIFEGND
LPLPQ
|
|---|
| |