| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2094 |
|---|
| Symbol | |
|---|
| ID | 4653967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 2343914 |
|---|
| End bp | 2345425 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639812070 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_959361 |
|---|
| Protein GI | 120555010 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATC CCAACAATTC TCGACAAATC AATCTCCTAC TGGACAGCGA TCCGCAACCC
ACGCTGATTC TGGCAGCCGA CGCAACGGTA TCCGACTGCA ACCGTACCAC CCGTGAGTTG
CTCACTATCA GTAAAGCACC GACACCAGAT GCTTTGTTAC CGGTAAACAC TCAGGCGCTG
GTGCAGGCGG CCATCGGCCA GGGCCGGGCC ATTGAGGATG TGGAGTCACG GTTCAGTGAT
CGAATCGTTC TGTGGAGCTT TATTCCCCTG CCAGAGGGCA CGCAGGTTCT GGTGCGCGGG
CGCGATGCCA CCAACGACAT TCGGGATCAG GAGCAGGCGG TCCGCTCCAA CCGGCTTTAC
CGCCTGATCA CTGAAAACAC CACCGACCTG ATCTCTCGCC ATGCCCCGGA TGGCCGTTTT
ATCGACGCCA CGCCCGCCTC CTGGCGGCTG CTGGGATACT GGCCCGAAGA GCTGCGCGGC
AAAGCCCTGG AAGACGTTTT CCAGGGGGAG AATCTGGCCG AAGAGCTGGC ACAAACCCGC
CACCGCCTGC GGGAAGACGG CTACGCCACC CTCACTCTGG AACTCCATCA CCGGGACGGC
AGCCGCCGCT GGTTCGAAAT TGCCAGCCGG GCCATCCGCG AGACATACAC CGGTGCCGTA
GTTGAAGTGA TCAGCGTCTC CCGTGATATT ACGGCCCGGG TAGAATCGGA AGAGCAGAAC
CGCCGCCTGG CAGACGAGCT GGCCCACACC GCCCGCCTGG CCACCCTGGG CGAGCTCGCC
TCGAGCATTG CCCATGAGAT GAACCAGCCG CTGGCCTCAA TCGTCAATTT CGCCAGCGCC
AGCCAGCGTT TTCTCAAGGA AGCCGATAGA CACCCGGACC GTCTGCTGAA AGTGGACGAC
GGTCTGCAGA AGATCGTGCA TCATGCCAAC CGGGCCTCAG AGGTCATCAA ACGGCTGCGA
GCTTTCCTGC GCAAGGGCCA GAAGCGCATG GCACCGGTCT CGCTCAATGC CGTTATCAGC
GACGTAGTGA AACTGTGCCA GTGGGAAGCT GAAAAAAACG GGGTCCGGTT ACAGGAGTAT
CTGGCCGCCG ATTCTCCCGT GATTACCGCA GACCCGGTTC TGCTGGAGCA GGTGTTGATC
AACCTGGTCC GTAACGGCAT AGAAGCCAAT GTCGAAGCCC GTGGCGAAAC CGGCCGGCTG
TCCCATATCG TGGTGACCAC CTGCATCAAC GATCAGCGCG AAACCCTGAT CCAGGTCACC
GACGAGGGCA CGGGCCTGGA TGACGAAGGC ATACGCCAGA TGTTTCAGCC GTTTTTCACC
AGCAAACCCA AAGGCCTGGG GCTCGGGCTT TCCATGAGCC GTTCGATTAT CGAAGGTTTT
GGCGGCTTTC TCGACGCCAT ACCCGCCGAA ACCGGCGGGC TGTCATTGAT CTGTCGATTC
CCGCCTAACC AGCACCGACT CGCCCCAAAT CGCACCGCAG ATTTCGCACA TCCGCCAGGA
GAAAAACCCT GA
|
|---|
| Protein sequence | MTDPNNSRQI NLLLDSDPQP TLILAADATV SDCNRTTREL LTISKAPTPD ALLPVNTQAL
VQAAIGQGRA IEDVESRFSD RIVLWSFIPL PEGTQVLVRG RDATNDIRDQ EQAVRSNRLY
RLITENTTDL ISRHAPDGRF IDATPASWRL LGYWPEELRG KALEDVFQGE NLAEELAQTR
HRLREDGYAT LTLELHHRDG SRRWFEIASR AIRETYTGAV VEVISVSRDI TARVESEEQN
RRLADELAHT ARLATLGELA SSIAHEMNQP LASIVNFASA SQRFLKEADR HPDRLLKVDD
GLQKIVHHAN RASEVIKRLR AFLRKGQKRM APVSLNAVIS DVVKLCQWEA EKNGVRLQEY
LAADSPVITA DPVLLEQVLI NLVRNGIEAN VEARGETGRL SHIVVTTCIN DQRETLIQVT
DEGTGLDDEG IRQMFQPFFT SKPKGLGLGL SMSRSIIEGF GGFLDAIPAE TGGLSLICRF
PPNQHRLAPN RTADFAHPPG EKP
|
|---|
| |