| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2047 |
|---|
| Symbol | |
|---|
| ID | 4657180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2284670 |
|---|
| End bp | 2285935 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639812023 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_959315 |
|---|
| Protein GI | 120554964 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.341858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGCA CGGCCTCCGG CACCTATGAT CGACTGATCA ACCCTGTACT TGTCGCAGGC
TGTATTATTA TTCTGGTTGG CTTTTCCGTG CGGGCCTCGT TCGGTCTGTT TCAACTGCCG
ATTGCCCTGG AATTTGCCTG GCCAAGGGAG TCGTTTTCTC TGGCCATCGC CATTCAGAAC
CTGTTCTGGG GCATCGGGCA GCCGATCTTT GGAGCTTTTG CCGAACGCTA CGGTGATCGC
AAAGCTATCC TGGTGGGCGG TATCTGTTAC GTGGTCGGGC TGGTTGCCTC GGCATTCGCC
ATTACCCCGG GCCAGCACCA GCTTCTGGAA ATGCTGGTTG GGTTCGGGAT TGCCGGAACC
GGATTCGGGG TCATCCTCGC TGTCGTAGGG CGCTCTGCCC CGGAAAAGCA TCGCTCCATG
GCGCTGGGCA TTGCAACCGC AGCCGGTTCT GCAGGGCAGA TCATTGGCCC GCCCGTCGCG
CAGGCGCTGC TGAGCCAGAT GCCCTGGCAA AGCGTGTTCA TGGTGCTGGC CGGTTTCATT
ACGGTGTCGA TGCTTGCCCT TCTGTTCATG CGGGCACCCA AGGCGGCACC CTCGGTCTCG
ACCGATGAAC CGATGGGAGT GGTGCTGAAG CGAGCGGTGA AAGACCCCTC GTTCCTGTTC
ATTTTTATCG GCTTTTTCTC TTGCGGGTAC CAACTGGCGT TCATCACCGC GCATTTTCCG
GCGTTTATTA CGGAAATGTG TGGGCCAATT ACGCCGGACA GCCTGATCTA CGTGCTGGGG
GTAACGTCAG CGTCCGGGCT CGGCGCCATC TCAATTGCCC TGATCGGTCT GTTCAATATC
GGTGGCACAC TGATGGCCGG CTGGTTGGGT AACCGATACT CGCGCAAGTA CCTTCTGGCG
ACGATTTACC TGTTACGAAC AATCGTCTCT GCCGCCTTTA TCATGGCGCC AATCACTCCT
GAAAGCGTTG TGCTCTTCTC GGTGGCGATG GGTTCGTTGT GGTTGGCAAC GGTACCGCTG
ACGTCTGGCC TGGTTGCGCA CATCTACGGG TTGAAGTACA TGGGCACGCT CTATGGCCTG
GTATTCTTTT CGCACCAGCT TGGCGGTTTT CTTGGTGTCT GGCTGGGTGG AGCCCTGTAC
GACCTCTACC ATAACTACAC GCTGGTGTGG TGGATCGGTG TTGGCGTCGG GGCCTTGTCG
GCACTGATTC ACCTGCCGAT TCGGGAATAC CCCTGGGAGA AGCGCGGGCA GGCGGTCGCT
GCCTGA
|
|---|
| Protein sequence | MSGTASGTYD RLINPVLVAG CIIILVGFSV RASFGLFQLP IALEFAWPRE SFSLAIAIQN
LFWGIGQPIF GAFAERYGDR KAILVGGICY VVGLVASAFA ITPGQHQLLE MLVGFGIAGT
GFGVILAVVG RSAPEKHRSM ALGIATAAGS AGQIIGPPVA QALLSQMPWQ SVFMVLAGFI
TVSMLALLFM RAPKAAPSVS TDEPMGVVLK RAVKDPSFLF IFIGFFSCGY QLAFITAHFP
AFITEMCGPI TPDSLIYVLG VTSASGLGAI SIALIGLFNI GGTLMAGWLG NRYSRKYLLA
TIYLLRTIVS AAFIMAPITP ESVVLFSVAM GSLWLATVPL TSGLVAHIYG LKYMGTLYGL
VFFSHQLGGF LGVWLGGALY DLYHNYTLVW WIGVGVGALS ALIHLPIREY PWEKRGQAVA
A
|
|---|
| |