| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1982 |
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| Symbol | fliR |
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| ID | 4654365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2211808 |
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| End bp | 2212593 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639811953 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_959250 |
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| Protein GI | 120554899 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.345887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCCGG CGGAGTTCAG TGCAGATCTG ATCGGCCAGT GGGTGGGGCA GCATATCTGG
CCCTTATTCC GGCTGGCCAG TTTCCTCATG GTCATCCCCA TCTTCGGTAC CCAGTTGGTA
CCCGCCCGTG TTCGGCTGGG ACTGGCGCTG CTGATGACCA TCCTGATTGC GCCCATGATT
CCTCCCGTTC CCCAGGTGGA AGCGCTAAGT GCCGACGCGG TCGTCATCAC GCTGCAGCAG
ATCCTGATTG GTATCGGCCT GGGCTTCGCG CTGACCGCAC TCTGGCAGTT GTTTGTGATC
GCCGGGCAGA TGATTGCCAT GCAGATGGGC CTGGGCTTTG CCTCCATGGT AGACCCCGCC
AATGGTGTTA ACGTGCCAGT GCTGGCTCAG ATCTACACCA TCACCATTAC TTTGCTGTTT
CTGGTGATGA ATGGCCATCT GGTGGCCTTC GAGGTGTTCA TCGAAAGTTT TTATACCTTG
CCTATTGGCC TGGAGGGGCT GGGGCAGGAT GGTGTGTGGG CGCTGGCCCA TCGCATTTCA
TGGATGTTTG CCTCTGCCAT GTTGCTGGCA TTGCCGGCCG TGACTGCGGT CCTGATTGTG
AACATCTCTT TCGGTGTAAT GACCCGTGCG GCGCCTCAGA TGAACATCTT CGCCCTCGGC
TTTCCGATTG GCCTGATTTT TGGGTTGTTT GCTATCTGGG TCTTACACGC CAATTTCCTG
CCACACTTCG ATCAGTACAC GCGGGAAACG TTTGATTTCA TGCGCGCTCT GCAAGGGCAA
CCCTGA
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| Protein sequence | MLPAEFSADL IGQWVGQHIW PLFRLASFLM VIPIFGTQLV PARVRLGLAL LMTILIAPMI
PPVPQVEALS ADAVVITLQQ ILIGIGLGFA LTALWQLFVI AGQMIAMQMG LGFASMVDPA
NGVNVPVLAQ IYTITITLLF LVMNGHLVAF EVFIESFYTL PIGLEGLGQD GVWALAHRIS
WMFASAMLLA LPAVTAVLIV NISFGVMTRA APQMNIFALG FPIGLIFGLF AIWVLHANFL
PHFDQYTRET FDFMRALQGQ P
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