Gene Maqu_1979 details

Gene Information

• Locus tag: Maqu_1979
• Symbol: upp
• ID: 4655065
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 2208718
• End bp: 2209356
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 639811950
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_959247
• Protein GI: 120554896
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.267185
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGATCC ATGAAGTGAA GCACCCTCTG ATCCGCCACA AGCTCGGCCT CATGCGCCGC 
GCCGACATCA GTACCAAAAA CTTCCGAGAG CTGGCACAGG AAGTTGGCGC GTTGCTGACT 
TACGAGGCCA CCAAAGACTT CAATCTTCAG GAAAAAACCA TTGAGGGCTG GGCCGGCCCG 
GTCTCCGTGG AGCAGATCCA CGGCAAGAAG GTAACCATCG TGCCCATCCT ACGTGCCGGT 
CTGGGCATGC TGGACGGTGT CCTGAGCCTG ATTCCGGTGG CCCGGGTGAG CGTGGTTGGC 
CAGATCCGCA ACGAAGACAC CCTCGAAGCG GAAACCTACC TGGAAAAACT GGTAGGCGAG 
CTGGATCAGC GCATGGCCCT GATCATCGAT CCGATGCTGG CTACCGGCGG CTCCATGATT 
TCCACCATCG ATTTGCTCAA AAAGGCCGGT AGCACCGAAA TCCGGGCTCT GGTTCTGGTG 
GCTGCGCCGG AGGGCGTGGA AAAGGTTCTG GAAAAACACC CGGACGTGTC CATCTACACC 
GCATCGGTGG ATGAGCGCCT GAACGAGAAA GGCTACATTC TGCCGGGCCT GGGTGATGCC 
GGCGACAAGA TCTTCGGCAC CAAGCAGAAG GACGTCTGA 

 

Protein sequence

MPIHEVKHPL IRHKLGLMRR ADISTKNFRE LAQEVGALLT YEATKDFNLQ EKTIEGWAGP 
VSVEQIHGKK VTIVPILRAG LGMLDGVLSL IPVARVSVVG QIRNEDTLEA ETYLEKLVGE 
LDQRMALIID PMLATGGSMI STIDLLKKAG STEIRALVLV AAPEGVEKVL EKHPDVSIYT 
ASVDERLNEK GYILPGLGDA GDKIFGTKQK DV