Gene Maqu_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_1978 
SymbolflhA 
ID4655064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp2206320 
End bp2208494 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content58% 
IMG OID639811949 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_959246 
Protein GI120554895 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGAG CTCTAGTCCT TAACAACGTC AAATCCCTGA CGCGGGGGAA CCTCGGCATC 
CCCCTGATGC TGATGGGGCT GCTTGGCATG ATGATTCTGC CCATGCCGGC GTTCCTGCTG
GATGTGTTCT TCACCTTCAA CATCACTCTG TCCATCGTCA TTCTGCTGGT CTGTGTGTAC
GCCATGCGGC CGATGGAATT TGCCTCCTTC CCCACGGTAT TGCTGGTGGC CACCCTGTTG
CGGCTGGGCC TGAACGTGGC GTCCACCCGG ATTGTATTGC TGAACGGCCA TGAGGGCGGC
GATGCTGCCG GTAAGGTGAT CGAGTCCTTT GGTGAAGTCC TGATTGGGGG GAACTACGCT
GTTGGCCTGG TGGTCTTCGC CATCCTTATG ATCATCAACT TCCTGGTTGT CACCAAAGGT
GCCGGCCGGG TGTCTGAGGT CAGTGCCCGC TTCACCCTGG ATGCCATGCC TGGCAAGCAG
ATGGCGATTG ACGCCGATCT GAACGCCGGG CTGATCAATC AGGACGAGGC CAAGTCACGC
CGTTCGGAAA TCGCTCAGGA AGCGGACTTT TACGGTTCTA TGGACGGCGC CTCGAAGTTT
GTGAAAGGCG ATGCCGTTGC AGGCTTGCTG ATCCTGGCGA TCAACATCGT TGGTGGTGTG
GCTATTGGCA TGATGCAGCA CGGGTTGGAT TTTGGTCTGG CAATGGAGCG CTATGCGTTG
CTGACCATCG GTGATGGTCT GGTTGCCCAG ATTCCCTCGC TGTTGCTCTC CACATCTGCC
GCCATCATGG TTACCCGGGT AACCTCCAGC CAGGACATGG GTGGCCAGAT CATTCAGCAG
ATGTTCAGCG CTCCCAAGGC GTTGGGCATT GCGGCGGGTA TCCTGATTCT GCTTGGCCTG
ATTCCGGGGA TGCCCCACAT CGCGTTTCTC GGCCTTGGTT TGCTGGCCGC TGGCGCAGCC
TGGTTTATCT GGAAGAAACA GCAGCAAACG GTTGAGGATG AAGGTGGTTT TGTTGGCCGC
GGCGGCATGG CTGGTGGTGC GGCCCGGCAG GGTGCGGAAA TTTCTCCGGA TCGTCCGGGT
AGCGAGGGGC AGGCACTGCC GGCGCCGGGG GAAACCCGCG AGCTCGGATG GGATGACGTG
GCCACGGTGG ACATTGTCGG GCTGGAAGTG GGTTACCGGC TGATCCCGCT GGTAGACAAA
TCCCAGGGTG GACAATTGCT CAGTCGGATC AAAGGGGTTC GTAAGAAGCT TTCGCAGGAT
CTGGGCTTCC TCATGCCTTC GGTGCACATT CGCGACAACC TGGATCTTAT GCCGAACGTC
TACCGGATTA CCCTGATGGG CGTGACCATT GCCGAGGCCG AGATCCATCC GGAGCGGGAG
CTGGCCATTG ATCCGGGGCA GGTGTTTGGC AAAGTTGAAG GCATTGCCGG CAAGGACCCC
GCCTTCGGCC TGGACGCCAT CTGGATTGAG TCCGACAGGA AGGATCAGGC TCAGACCCTG
GGTTACACCG TGGTGGATGC GAGTACCGTG GTGGCGACAC ATCTGAATCA GATCCTGCAG
AAACACGCTC ATGAACTGAT TGGCCACGAA GAAGCCCAGA AGTGGCTGGA CCAGTTGGAG
AAGATTTCGC CCAAGCTGGC GGAGGAACTG GTGCCGACCA CGATTTCCAT CAGCATCCTG
TTGAAAGTTT TGCAGAACCT GTTGAAAGAA GAAGTGCCGG TGCGGGATAT GCGCTCCATT
GCCGAGGCCA TCGTGAACGT GCATCCAAAG AGTCAGGACC CGAAAGTACT GACCACGGTA
GCCCGCCAGG CGCTGCGCCG GATGATTGTT CAGAGTATTT GTGGCAACGA CGCCGAAATC
CCTGTTATCA CGTTGGATCC AGACCTGGAA CAGTTATTGC TGAAGTCTGT TCAGCAGAGT
CAACAATCCG GCGGTCAGGA TGACATTGGT CTGGTGCTTG AGCCCAACAT GGTGGAAAAG
CTGCAACGAT CCCTTCAGGA CAGCGTGCAG CGCCAGGAAA TGCTCGGCAA GCCCGCCATC
CTGCTGGTTT CGGGGCCCTT GCGGCCAGTA CTGGCGAAGT TTGCCAGCTA CGGGGTAGAG
CGTTTGCATG TGCTCTCTTA CCAGGAAATC CCGGATAACA AACAGATCAC GATAGTCGCT
TCTGTGGGTC AATAA
 
Protein sequence
MDRALVLNNV KSLTRGNLGI PLMLMGLLGM MILPMPAFLL DVFFTFNITL SIVILLVCVY 
AMRPMEFASF PTVLLVATLL RLGLNVASTR IVLLNGHEGG DAAGKVIESF GEVLIGGNYA
VGLVVFAILM IINFLVVTKG AGRVSEVSAR FTLDAMPGKQ MAIDADLNAG LINQDEAKSR
RSEIAQEADF YGSMDGASKF VKGDAVAGLL ILAINIVGGV AIGMMQHGLD FGLAMERYAL
LTIGDGLVAQ IPSLLLSTSA AIMVTRVTSS QDMGGQIIQQ MFSAPKALGI AAGILILLGL
IPGMPHIAFL GLGLLAAGAA WFIWKKQQQT VEDEGGFVGR GGMAGGAARQ GAEISPDRPG
SEGQALPAPG ETRELGWDDV ATVDIVGLEV GYRLIPLVDK SQGGQLLSRI KGVRKKLSQD
LGFLMPSVHI RDNLDLMPNV YRITLMGVTI AEAEIHPERE LAIDPGQVFG KVEGIAGKDP
AFGLDAIWIE SDRKDQAQTL GYTVVDASTV VATHLNQILQ KHAHELIGHE EAQKWLDQLE
KISPKLAEEL VPTTISISIL LKVLQNLLKE EVPVRDMRSI AEAIVNVHPK SQDPKVLTTV
ARQALRRMIV QSICGNDAEI PVITLDPDLE QLLLKSVQQS QQSGGQDDIG LVLEPNMVEK
LQRSLQDSVQ RQEMLGKPAI LLVSGPLRPV LAKFASYGVE RLHVLSYQEI PDNKQITIVA
SVGQ