| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1955 |
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| Symbol | |
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| ID | 4655445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2185043 |
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| End bp | 2187040 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639811926 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_959223 |
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| Protein GI | 120554872 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCCGG AACTCGGACA GCTCGCACTG ATTCTTACGT TGCTGCTGGC AGTACTTCTC
TCCGTGGTGC CGCTTGCGGG CGCTCTGACC GGGCGTGACA GTCTGCAGGC ATTTGCCCGG
CCACTGGCCT CCGGCATGTT TGTATTCACC GCCCTGGCGT TTGCCATCCT CACCCATGCC
TTTTTGGTGG ATGATTTCTC GGTCGCGTAC GTAGCCAACA ACAGCAACAG CATGTTGCCC
TGGTACTACA AGTTCAGTGC GGTCTGGGGT GGGCACGAAG GCTCGTTGCT CTTGTGGATA
CTGATGCTCA TAGGCTGGAC GCTGGCCGTG GCCATCTTCA GCCGGAAACT GCCTTCGGTG
ATGGTCTCAC AGGTGTTGTC GGTTCTGGGC ATGGTCTCCG TTGGCTTCCT TCTGTTTATC
ATTCTGACCT CCAACCCGTT TGACCGTCTG CTGCCGAACG TACCGGCAGA TGGGCAGGAT
CTGAATCCGC TGTTGCAGGA CATCGGCCTG ATCATGCACC CGCCCATGCT CTATATGGGT
TATGTTGGTT TTTCGGTGGC CTTTGCGTTT GCCATTGCGG CATTGATCAA CGGCCGACTG
GATGCGGCCT GGGCTCGCTG GTCGCGCCCC TGGACCACGG TTGCCTGGTC CTTCCTGACG
GTGGGCATCG CCCTGGGCAG CTGGTGGGCC TATTACGAGC TTGGCTGGGG CGGCTGGTGG
TTCTGGGACC CGGTTGAAAA TGCCTCACTA TTGCCCTGGC TCTCGGGTAC CGCCTTGATG
CACTCGCTGG CAGTCACGGA AAAGCGCGGG GTCTTCAAAA GCTGGACCGT GTTGCTGGCT
ATTGTCACTT TCGCACTGAG CCTGCTGGGT ACCTTCCTGG TTCGTTCCGG TGTGCTCACC
TCCGTTCACG CCTTCGCGTC GGATCCGGAG CGAGGCAGTT TCCTGCTGGC GCTGCTGGGC
ATTACCATTC TGGCCAGCCT GACACTCTAT GCCTTCCGGG CGCCGGTAGT GCATGTCCGC
TCCCGTTATG GCTCTCTGTC CCGGGAAATC TTCCTGCTCC TGAACAATGT CTTGCTGGTA
TCTGCCACGA TGCTTGTGGC CATCGGCACG CTTTACCCGC TGGTGCTGGA TTATCTGGAT
CTGGGCAAGC TGTCTATTGG TGAACCGTTC TTCAATACCA CCTTCAGTCC TCTAGCGGTG
GCAACTGGCC TGCTGCTGGG CGCAGGCATT TTCTCGCGTT GGAAGAAAAC CGACGGCGGC
TGGCTGGCCC GAAAACTGCT GTGGCCGCTG GCGGTCAGCC TGATCGCCAG TGCCGCGGTG
ATGATCGGTT ACGGTGGGTT TGCGCCCTGG GCCTTCCTGG GTGTGTTTGC CGCCATGTGG
GTGACTGTTG CCACCGTCTG GGATATTTGG GATAAATCGA CATCCCGCAA AGGGCGCTGG
CATGGCCTGA AGCGCCAGTC TCGCAGTTAC TGGGGCATGG TGCTCGGGCA CCTGGGGCTT
GCTATGGTAA TGGCCGGTGC GACGGTGGTT TCCAACTACG GCATCGAGCG TGATGTGCGC
ATGCAGCCGG GTGACCGCGC CATGGTGGGG GATTACGAGA TTGTCTTTAC TGACATCGGT
GAGCGTCGTG GTGCCAACTT TACCGCCCAG TACGGCAGCT TCAATGTCTA CCTGGATGGG
GAGCTGGTGA CCGACCTGCA TCCGGAAAAA CGGCAGTATC CGGTTGGCAT GAGTGTGATG
ACCGAAGCGG ATATTGATGC CGGTCTGTTC CGGGATGTGT TTGTGGCCAT TGGTGAACGC
ATCAGTGACG ATGCCTGGGC TATCCGCCTG CAATATAAAC CTTTGGTGCG CTGGTTGTGG
CTCGGTTCGC TGGTGATGGC CATCGGTGGT TTCCTGGCGA TTGCTGACAA GCGCTACCGC
ATCCGTGTGC GCGACGAGGA AGCGGTGAAA AGCGGCGAGC CGGCAGCTCC GGGTAAAGTG
GCGGAGGCGT CCTCATGA
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| Protein sequence | MYPELGQLAL ILTLLLAVLL SVVPLAGALT GRDSLQAFAR PLASGMFVFT ALAFAILTHA
FLVDDFSVAY VANNSNSMLP WYYKFSAVWG GHEGSLLLWI LMLIGWTLAV AIFSRKLPSV
MVSQVLSVLG MVSVGFLLFI ILTSNPFDRL LPNVPADGQD LNPLLQDIGL IMHPPMLYMG
YVGFSVAFAF AIAALINGRL DAAWARWSRP WTTVAWSFLT VGIALGSWWA YYELGWGGWW
FWDPVENASL LPWLSGTALM HSLAVTEKRG VFKSWTVLLA IVTFALSLLG TFLVRSGVLT
SVHAFASDPE RGSFLLALLG ITILASLTLY AFRAPVVHVR SRYGSLSREI FLLLNNVLLV
SATMLVAIGT LYPLVLDYLD LGKLSIGEPF FNTTFSPLAV ATGLLLGAGI FSRWKKTDGG
WLARKLLWPL AVSLIASAAV MIGYGGFAPW AFLGVFAAMW VTVATVWDIW DKSTSRKGRW
HGLKRQSRSY WGMVLGHLGL AMVMAGATVV SNYGIERDVR MQPGDRAMVG DYEIVFTDIG
ERRGANFTAQ YGSFNVYLDG ELVTDLHPEK RQYPVGMSVM TEADIDAGLF RDVFVAIGER
ISDDAWAIRL QYKPLVRWLW LGSLVMAIGG FLAIADKRYR IRVRDEEAVK SGEPAAPGKV
AEASS
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