| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1903 |
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| Symbol | |
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| ID | 4654340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2122459 |
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| End bp | 2125647 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639811874 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_959171 |
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| Protein GI | 120554820 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGAA GCTCTTCCCG TCCCAATCTG TTTGGGGTTC AGGCGTTGGC GGTGATGGGC
GTGCTGGCCA TTGCGTTGCT GTACGTAGTA CACCCGCGGG AGGCGTTTTT TGACCAGATC
GGCAGCCTTG AGGAGCCGGA TGCGCTCTCC CTGGCTTACC TCACCGTGTT GCTGAATTCT
GATTCTGATA ATAAAGAGTT GCGCTATCGG CTTGCCCAGA TGCAATCGGA TGTTGGTGAA
TCCGAACAGG CCATGGCAAC GTTGAGCCCC TTGCTCCATG AGCCGACAGT GTCGCCGAAA
GCCGTGGAGC TGGCCTTGAC GTTGGCCATT CAGAAACTGG CGGCTGCGAC TGATGAGCCT
ACCCGCGCTG AGCGAAAGGC TGACCTGCTG GTTCTGGTTG AGCGGCTGCT TGGGGGCGCA
GGGGCCCATC CCCGCGTACA CAGGAGCGTC GAGACGGTGC TAGGCTGGCT CACGCCGGAT
GAGCAACTGA GTTTGCTGCC GACGTTGATT TCATCAGCGG AGGGGCAAGA CCGGTTGTGG
TTAGTGATGT CGCTAGGACA TGCTCAGGTC GCAGCCGGGA ACCCGGCAGG CGCTGCGGAA
ACCCTTGCCG GTATAGTCGA CCAGTTACCC GCTGGGGAGC AGGACAAAGC GGCCAGGGAG
CTGGTGCGAC TATACCTTGC CTCCGGTCAA CCCGTCCGCG CGCTGGATAC CTTTCAGGCC
CGGAATCTGA TGTCTCCCGG AGCCGCGGGG CTGCAAGAGG CCATTCAGTT GGCCCGATTG
GCGGGCAAAG ACGGTCTGGA ACGACAATGG CTAGAGTCGT TGATGCGACA GTATACGGCC
GATATCACCG AACTCCGTCG TTTGCGAGCC CTGCAGTTGG GGCAAGGAGA TCTGGTCCAG
GCGGCAATGA CGGCTGAGCG CGTTGCCGGG ATGCCGGCGG CCGTGGCTGA GGATCGAATC
TGGGCCGCCA GGGTATTGGA GTGGCGAGGG CAGCCGGAGA AAGCCCTGGC CCGCTGGCAG
TCGCTTTATC TTTCTGCCGG TCACCCCGAG GCAATGCAGC GCGCAACAGC GCTTGCTCAG
GAACTGTTTC GTTGGCCTGA ACTGGTGAAA ATTCTAGAGA CGGCGAGGGC AAGAGGTGAG
CTTGGGGCCG ATGGTTACCT TGTGCTTGGT GATGCCTATA CCAGAGCGGT GGAGCTGGAC
AAGGCAGTTG CGGTGCTTGA GGAAGCACAG CGAAAGTATC CCTCCGTCGC CGGGTTCAAG
GACCGCCTGT ATCAGTTGTA CGTCAACAAC AATCGTTATC TAGACGCCAT TGCCCTGTTC
GAACGGCAGG ATGTGCTCAG TGAGGGAGAC CGATTGGTTC TGGCCAATCT GTATTGGCGA
ACCCGGCGCG TAGAGCGAGC GTTCGAAACC CTGTCGGTAT CGTTCCAGAA TCCGGAGTTC
GCTGCAGAGG CAGAGCTGAT GCGGCTGGAC CTTCTGACCA TGCTGGGGGA TGTCGACAAG
ATCCGCGCTG AGTATTCGCA ATTGATGGCT GGTTCCTGGC GGCAGCATGG ACCTGGTGTG
GCGGATCGGC TAATCGGCCT GGCCGCGCAG TTCGGGGATT ATGAGCGTGT TGCGGAGCTC
GCCAGGTACC GGTTTCAACG TACCGGGAAT GCCCGTTACA TCCCTATTCT TGCCGATGCA
CAGGCGAATA CGGGGCAGTG GGAGGCGTTG GAGCGTACGC TGGCGCAGTG GCAGTCAGAC
CCGGCCCACC GTCAGGATGG CCTTTACTGG ACATTCCGGG GGCGACTGTT TGAGCAGCGG
GGCAAGGCTG ATGACGCAGA GAAGGCCTAT CGACAGGCGC TGCGTCTGAA TCCTGGAAGC
GAGGACATCC TCAGCGCGTG GGGCTGGCTG CTGGTGGCAG AACCTCAGCG CGAGAGCGAT
AAGCTGAATG CCATTCTGAC AGAACTGTCA TCGCAATCCG GGCAGAGACA GTATGCGTTG
CTTGCGTATG GATACTCGGC ACTTGGTCAG GATAAGCGGT CCAGGTACTG GTTACAGAAG
TGGCGAACGG AGAATGCCGT TGAGCCCCGC GCTCTTGAGG AGCAGGCGGG TCTCGCCCAG
AGTCTTGGCG ATCAGGCGAG TGCTTTTCAT CTCAGACGTC TTGCCGCTCG ACAGGTTCCT
CGACGCGTCG AGCCAAGAAC CCCGTCACGG CAAAGAAGCC CTGATGAGCT TTCCTCCGGA
TACAGGGTGC AACCGGTGTT TGGTTCCGAG AACCGGGCTG CCCAGTTGGG CTGGCAGCAG
GAGCGCATCA GCGACATGGC TGTGAATCAT TGGTTCGGCG CTTGGGACTA CAGTTCGGAA
CGCTATCGGC TGACCGGGCG AGCGGCCCGC GTTGATGCCA GCGACGACAC GAGATTCAGG
AAGGCTCCCG AACCGTCCAG GGAGGCCATG ATCGAACTGC AGAATAACGC CACAGATTGG
TTGTTTACGG CTGGACTCGG GCACGTGGGG CGTCTTGACG GCGATGAATT GCGTACAAAG
TTTGAGGCCC GGTTCCAACC ACTGGGCCGG TGGCAGATGG CAGTGGGGTA TCATTCGGGG
GAGCGTTCGA CCGATTCGGC AGAAGCCTGG TGGCTGGTTT CCAGGGATCG CGCTTCGTTT
GAGGGCCTTT ACCAGCCAGA CAGTCGAACG ACCGTTGGGG CGCGGTTAGA ATCACTGTCA
TTTGATGTCG GTTCGCAAAG TAGCGTGGCG GAGGGGCAGC GGCTTGAGGT ATTCGGTAGT
CATCTCTTGG CTCGCCGTTA TCCGGATTGG AGTGTGCGCG CGGAATATGT GCTGCAGGAT
CTGAATCGAC TAGAACGCCT GGAAGGCTCA GTGCAATCGC TGTTTGAACG ACCGCTCCAG
ACCGGTGAAT TGCTCACCGA ACACTACGAG CGCCTGTCTG TCGGTATGCG GTGGCAAGAG
CATTCACCTC ACTCATTGCT CGAGCAACAG GCTCAGCCGG GCTGGTTCCT GGATGTGAAC
ACCGGCTATG TTCTTTCCAC CGATACCGTC GAGTACGGGC TTGGCGGCGG TGTAAGCTGG
TCGCTATTCG GGGATGACGA GATCGCACTA TCTGCCGGCT ATGCGTCGGA TAGTCTGAGT
GGAGCCAGCT CGCTGGACGC ACGTGTTACC TATACCTTGT TTTTCAAAAC TGCGGGAGAA
AACCGATGA
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| Protein sequence | MRRSSSRPNL FGVQALAVMG VLAIALLYVV HPREAFFDQI GSLEEPDALS LAYLTVLLNS
DSDNKELRYR LAQMQSDVGE SEQAMATLSP LLHEPTVSPK AVELALTLAI QKLAAATDEP
TRAERKADLL VLVERLLGGA GAHPRVHRSV ETVLGWLTPD EQLSLLPTLI SSAEGQDRLW
LVMSLGHAQV AAGNPAGAAE TLAGIVDQLP AGEQDKAARE LVRLYLASGQ PVRALDTFQA
RNLMSPGAAG LQEAIQLARL AGKDGLERQW LESLMRQYTA DITELRRLRA LQLGQGDLVQ
AAMTAERVAG MPAAVAEDRI WAARVLEWRG QPEKALARWQ SLYLSAGHPE AMQRATALAQ
ELFRWPELVK ILETARARGE LGADGYLVLG DAYTRAVELD KAVAVLEEAQ RKYPSVAGFK
DRLYQLYVNN NRYLDAIALF ERQDVLSEGD RLVLANLYWR TRRVERAFET LSVSFQNPEF
AAEAELMRLD LLTMLGDVDK IRAEYSQLMA GSWRQHGPGV ADRLIGLAAQ FGDYERVAEL
ARYRFQRTGN ARYIPILADA QANTGQWEAL ERTLAQWQSD PAHRQDGLYW TFRGRLFEQR
GKADDAEKAY RQALRLNPGS EDILSAWGWL LVAEPQRESD KLNAILTELS SQSGQRQYAL
LAYGYSALGQ DKRSRYWLQK WRTENAVEPR ALEEQAGLAQ SLGDQASAFH LRRLAARQVP
RRVEPRTPSR QRSPDELSSG YRVQPVFGSE NRAAQLGWQQ ERISDMAVNH WFGAWDYSSE
RYRLTGRAAR VDASDDTRFR KAPEPSREAM IELQNNATDW LFTAGLGHVG RLDGDELRTK
FEARFQPLGR WQMAVGYHSG ERSTDSAEAW WLVSRDRASF EGLYQPDSRT TVGARLESLS
FDVGSQSSVA EGQRLEVFGS HLLARRYPDW SVRAEYVLQD LNRLERLEGS VQSLFERPLQ
TGELLTEHYE RLSVGMRWQE HSPHSLLEQQ AQPGWFLDVN TGYVLSTDTV EYGLGGGVSW
SLFGDDEIAL SAGYASDSLS GASSLDARVT YTLFFKTAGE NR
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