Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_1876 |
Symbol | |
ID | 4657031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 2090822 |
End bp | 2093992 |
Gene Length | 3171 bp |
Protein Length | 1056 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639811846 |
Product | ribonuclease |
Protein accession | YP_959145 |
Protein GI | 120554794 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.166122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TGCTGATCAA TGCAACTCAT CCCGAAGAGT TGCGCGTCGC GCTGGTTGAC GGCCAACGGC TGTTCGACCT TGATATCGAA TCCAGTACCC GCGAACAGAA AAAGGCCAAC ATCTACAAGG GCCGCATTAC CCGCGTAGAA CCCAGCCTTG AAGCGGCTTT CGTTGACTTT GGCGCAGAGC GCCACGGCTT CCTGCCCCTG AAGGAAATCT CCAAAGAGTA TTTCAAGAAA TCGCCCGGGC AGATTGAGGG CAAAATCAAC ATCAAGGATG TTGTCTCTGA AGGTCAGGAA GTGATCGTTC AGGTCGACAA GGAAGAGCGT GGCAACAAGG GCGCCGCCCT GACCACCTTC ATCTCCCTGG CTGGCCGTTA TCTGGTGCTG ATGCCGAATA ATCCCCGTGC AGGCGGTATC TCACGCCGGA TTGAAGGCGA TGACCGAGCC CAGTTGAAAG AGGCCATGAA CGGTGTCCAG GTGCCGAAGT CCATGGGCAT TATTGTGCGT ACTGCCGGTA TTGGCCGCAC CACCGAAGAG CTCCAGTGGG ACCTCGACTA CCTGGTACAG TTCTGGGAAG CCATTACCCA GGCGGCTGGC GAGCGCAAAG CGCCTTTCCT GATCCACCAG GAAAGCAATG TGATCATCCG CGCCGTGCGC GATTACCTCC GCCAGGATAT CGGCGAAGTC CTGATCGATG CCGATAACGT TTACGAAGAC GTGTTGAGCT TCGTTCGGGC GGTCATGCCC ACCTTCGAGA ACAAGATCAA GCTGTACAAG GACGAAATCC CTCTGTTCAG TCGTTACCAG ATCGAAGGCC AGATCGAAAC GGCGTTCCAG CGCGAAGTGA AACTGCCCTC CGGCGGCTCG ATTGTCATCG ACCCGACCGA AGCCCTGGTG TCCATTGACA TCAACTCATC CCGGGCCACC AAGGGGCAGG ATATTGAAGA AACGGCCCTG CAGACCAACC TTGAAGCGGC CGAAGAAATC GCGCGGCAAC TACGCCTGCG GGATATGGGC GGCCTGATCG TTATCGACTT CATCGACATG ACGCCAGCCA AACACCAGCG GGAAGTCGAG CAGAAGATGC GTGAAGCGCT GGAACTCGAC AGGGCCCGCG TTCAGGTTGG CAAGATCTCG CGTTTCGGCC TGCTGGAAAT GTCACGCCAG CGTCTGCGTC CCTCACTGGG CGAGACCCGC AGCGAGGTTT GCCCACGCTG TGAAGGCCAG GGCACCATCC GGGGTATCGA ATCTCTGGCG CTGAGCATCA TGCGCCTGAT CTACGAAGAA TCCTCCAAGG AGAAGACCGC AGAAGTACGA GCCATGGTGC CGGTTTCTGT GGCCACCTTC CTGCTGAACG AAAAACGCAA GCAGCTGGCC GACATTGAAG CCCGTCAAGG CGTAGCGGTT GTGGTCGCAC CTGTGCCCAA CATGGAAACG CCGCACTTCG AGATTCTGCG CCTGCGTCAG GACGAAACCT CTCCAGAGCA TGTCTCCAGC CATCAGGTAG CTCAACAGTA CAGCGAGCGC GAGGAAGAGG CAGCCGTAGA AGTTGCAAGT GCCGAGAAAC CGGTGCGCGA ACAGGCCGCC GTGAAAGCTA TCCGCCCCTC TGCGCCAGCC CCAGCACCGA CAGCCGCTGC ACCAACGGCT GCTGCTGAGC AGGAAGAAGG CCTGTTCCGC AAACTGGGCA AGAAGATCGC GTGCTTCTTC CGGGGTGAAG AACCGGAGCA GGAAGCCAGC CACGACACCA ACCGCAACCG AAGTGAAGAG CGTCGCAACC AGGCCCGCCA GGATCGCCGC AAATCCCGTG TTGCCCGCGA TGACCAACGC ACCGGCGGCA ACCGCAGCGG CAGTGATCGC CGCCAGGGTA GCCAGCAGAA CCGTGGCGAC GACAACCGGG GCCGCAATCG TGGTGGCCGT GGTGACGATC AGAATCGCGG TGAACGCGGT GGCCAGAACC GTTCCAACCG GGACGACCGC TCTGGCGACA GCAAGGGCAA TGACAACCGC CGGGACAACC GCAAGGACTC CCAGGGCCGC GGCCAGAACC GGAACCGTCC CCAGCGTGAC CAGAAAGGCC CGCAGGACAA CCGGGAACAG CAGGAATCCC AGAAGGGACC TTCCAACGAC AAGCAGGGCG GTGACGACAA GCAACGCAAA CCACGCCGGC AACGTAACCG GGACGGCTCC CCCGCCGAGA CTCCGGCATC TACGCCAGCA GAACGCAAAG CGGAACGCAG CGAGAAGCAC CAGAAAGATA CCCAGCCGGA AAAAGCGGCT GACAAGACAG CTCCTGTGGA CGCTAAAGCC AGTGAGCCGC GCGTAGATAA AGCCGAGCAA CCGGCCGCAA CAACGCCGGA AACCAAAACT GCGCCAGAGA GCCGCAAGCC TGAACAACAG GAAATGGCCG AGAAGCCGGA GACCAAAACC GAACAGGCCG AGCAGAAAGA GGCTCCCTCA GCAGAAGACA AGCCTGAAGC AAAGGATGAG AGCAGCCGCA AAGAGAAGTC TGACGGCCGC AGAGGCCGCA GCTCCGGCCG CCAGCGCAAG CCTCGCTCTG CGGATAGCGC TGAAAAATCC GGTGCTGCCG AAGACAAGGG TGACAAGGAG AGCTTGCCGG CAGAAGCCGA GCAGAAACAG GCCGCCAAGC CTCAGCGTAC CGAGCAGGTC ACCGCAACAG AAGCCGAGCA GCCTGCAGAA AAGGCCAGCG CCGAGCCTGC CAAAGCCGAA GACAAAGAAC CGGTCAAGGC AGAGGCCAAG GCACCCCGGC AAGCCAAGGC TGACTCACCG AAGGCGTCTG AGCCGGAAAC CGGCGCGGCT TCTGATCAGA AGGCTGCCGA GGATAAAGCC GACAAGGCGC CGGAACAGAA AGCCGAGGCC GCTAAAACCG AGCCTGAAGT AGATACGGCG CCGGAGAAGC AGGCCGGATC CAGCAGCGAA AAACCCGCTG ACAAACCGGA GCAGCCTGCA GAGCCCGTAA AAGCCGAGCC AGCTCCGGCC AGCGAAAAGC CAGCGGAGCA GAAAGAAGAG ACTCAGGAAG CCAGTGCATC GGAAGCTATC CCGGTGACTC CGGGCCGGGC CTATAATGAC CCAAGGGAGG TCCGCAAGCG CCAACGCGCG GCCGAAGAAG CCAAAAAGGC AGAAGAGGCC AAGCAGGCCG GGAGCAACTG A
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Protein sequence | MKRMLINATH PEELRVALVD GQRLFDLDIE SSTREQKKAN IYKGRITRVE PSLEAAFVDF GAERHGFLPL KEISKEYFKK SPGQIEGKIN IKDVVSEGQE VIVQVDKEER GNKGAALTTF ISLAGRYLVL MPNNPRAGGI SRRIEGDDRA QLKEAMNGVQ VPKSMGIIVR TAGIGRTTEE LQWDLDYLVQ FWEAITQAAG ERKAPFLIHQ ESNVIIRAVR DYLRQDIGEV LIDADNVYED VLSFVRAVMP TFENKIKLYK DEIPLFSRYQ IEGQIETAFQ REVKLPSGGS IVIDPTEALV SIDINSSRAT KGQDIEETAL QTNLEAAEEI ARQLRLRDMG GLIVIDFIDM TPAKHQREVE QKMREALELD RARVQVGKIS RFGLLEMSRQ RLRPSLGETR SEVCPRCEGQ GTIRGIESLA LSIMRLIYEE SSKEKTAEVR AMVPVSVATF LLNEKRKQLA DIEARQGVAV VVAPVPNMET PHFEILRLRQ DETSPEHVSS HQVAQQYSER EEEAAVEVAS AEKPVREQAA VKAIRPSAPA PAPTAAAPTA AAEQEEGLFR KLGKKIACFF RGEEPEQEAS HDTNRNRSEE RRNQARQDRR KSRVARDDQR TGGNRSGSDR RQGSQQNRGD DNRGRNRGGR GDDQNRGERG GQNRSNRDDR SGDSKGNDNR RDNRKDSQGR GQNRNRPQRD QKGPQDNREQ QESQKGPSND KQGGDDKQRK PRRQRNRDGS PAETPASTPA ERKAERSEKH QKDTQPEKAA DKTAPVDAKA SEPRVDKAEQ PAATTPETKT APESRKPEQQ EMAEKPETKT EQAEQKEAPS AEDKPEAKDE SSRKEKSDGR RGRSSGRQRK PRSADSAEKS GAAEDKGDKE SLPAEAEQKQ AAKPQRTEQV TATEAEQPAE KASAEPAKAE DKEPVKAEAK APRQAKADSP KASEPETGAA SDQKAAEDKA DKAPEQKAEA AKTEPEVDTA PEKQAGSSSE KPADKPEQPA EPVKAEPAPA SEKPAEQKEE TQEASASEAI PVTPGRAYND PREVRKRQRA AEEAKKAEEA KQAGSN
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