| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1840 |
|---|
| Symbol | |
|---|
| ID | 4656553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2052653 |
|---|
| End bp | 2053288 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639811806 |
|---|
| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| Protein accession | YP_959109 |
|---|
| Protein GI | 120554758 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00801203 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA AACCGTTTGA TGGCCCTACA ATGATAACCA GCTCAGGCCT GGTGCCGATT
GTTATTGAAC AGACGGCACG CGGCGAACGT TCGTTCGACA TTTATTCCCG TCTGCTCAAG
GAGCGGGTGA TCTTTCTGGT TGGCCCGGTT GAAGATCACA TGGCAAACCT CGTGGTTGCC
CAGTTGCTGT TCCTGGAATC CGAAAATCCG GACAAGGATA TCCATCTTTA TATCAACAGT
CCGGGTGGCT CCGTTTCCGC CGGCATGTCC ATTTACGACA CCATGCAGTT CGTGAAGCCG
GACGTAGCAA CGCTTTGCAT CGGTCAGGCA GCCAGCATGG GTGCTTTCCT GTTGTCGGGT
GGCGCGAAGG GCAAGCGTGC CTGCCTGCCA CACTCCCGTG TAATGATTCA TCAGCCGCTG
GGCGGCTATC AGGGGCAGGC GACGGACATC GAGATCCATA CCCGTGAGAT CCTGAAAATC
CGCAACACGC TCAACGAGCT GCTTGCGGAG CACACGGGTC AGGACATCGA GACCATCGCC
CGGGATACCG ACCGTGATAA TTTCATGGAT CCTGCCCAGG CCAAAGAGTA CGGGTTGATC
GATACAATAC TTGATAAGCG CGTATCGAAT AAATAA
|
|---|
| Protein sequence | MTQKPFDGPT MITSSGLVPI VIEQTARGER SFDIYSRLLK ERVIFLVGPV EDHMANLVVA
QLLFLESENP DKDIHLYINS PGGSVSAGMS IYDTMQFVKP DVATLCIGQA ASMGAFLLSG
GAKGKRACLP HSRVMIHQPL GGYQGQATDI EIHTREILKI RNTLNELLAE HTGQDIETIA
RDTDRDNFMD PAQAKEYGLI DTILDKRVSN K
|
|---|
| |