| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1836 |
|---|
| Symbol | |
|---|
| ID | 4656549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2046177 |
|---|
| End bp | 2048030 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639811802 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_959105 |
|---|
| Protein GI | 120554754 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.900571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCAAG ATATTCGGGA TAACGCCCAG AGTACGATCG CCAAGGTTAT CGTTGGCCTA
TTGATTATTT CCCTCTCGAT CTGGGGAATG GATGCCATCA TTGGCGGCTT CACTGGCGAG
CCAGAAGTGG CAACGGTTAA CGGCCAGGAC ATCACCGAGC GGGAGTTTCT GCGTACCGTA
CAGATGGAAA GTCAGCAGCG CCTGATGCAG ATGGAGAATC GGGATCAATC CCTGTTGGAC
GAGGATCAGA TTCGCCGCGA CGTGCTGGAT GCGTTGATCC GGGAGGCCGT GCTCACTCAG
GACGCTCAGA GCCAGGGGCT GGAGCTGACC GACGCCGACA TCGATTCCCT GATTACCCAG
ATGCCCCAGT TCCAGGTGGA TGGCCAGTTC AATCGTGATC GGTTTGTAGC CACAGTGCGC
AATGTGGGCA TGGGCGTTGC CGAGTTCCGC GAAAGCATAC GCAAGAACTA CGTGGTAAAC
CAGATTCGCG CGGCGATCGC CCAGACCGGT GTCGTGGCAC CTGAGAATGC AGCCCATTTG
CTGGCCATTC AGAACCAGAC CCGTGACTTC CGCGTGCTGA CTCTCGATGG CAGTAGTGTT
CAGGACCAGG TGGATGTGAC CGAGGCGGAC GTACAGGCGT ACTACGACGA GAACCTTAAC
CAGTTTCGTC AGCCAGAGCA GGTGGATGCT GCCTACATTA CCTTGTCCCA GGGAGCGTTG
GCGGAGTCCA TCGAGGTCGC CGAAGATGAA TTGCGGACCT ATTACGAAGA GCGTGCTGAA
GAATACGCAC GGGAAGAGCG CCGTGCCGCT CACATTCTTG TAGAGGCCGG CGATGAAGGG
CAGGCGACTC TCGCAACCAT CCAGCAGCGC CTTGAAAAGG GTGAGTCGTT TGCCGTCCTG
GCCGAGGAAT ACTCAGTCGA TACCGTGTCT GCGCAGGAAG GTGGTGATCT CGGTTTTGCC
GGCCGTGGTG TCTACGATGA AGCCTTTGAA GACGCTCTGT TTGGGCTGGA AGAAGGCGAA
GTTTCTGGCC CGGTTGAGAC CAGCTTTGGT CTTCATCTGA TCAAGCTGGA AGAGGTGCGC
CGCTCCGATG TGCCTGCCTT TGACGAGTTG CGTGAAGATC TGCGACTCGA ATTGGCCAGA
ACCAAGGCCA GTGAGCGTTT TGCGGAAGTT CGCTCGCAAC TGGCTGATGC GGCCTACGCT
GCCGACGATC TTGCCGGCCC GGCCGAAGAG CTGGGTCTGG AAATTCGGGT GGTCGAAGGT
GTCAGCAGGG ATGGCGGTGC AGCACCCTTT GATCATGCGG GTCTGGTGCG TCAGCTGTTC
TCCGAAGATG TACTTGAGGG TGGCTACAAC ACCGAGTTGA TCGACGTGGG TGATAACGTG
TCGGTAGTTG CCCGGGTGCG CGAGTATCAC GAACCGCGCC AGTTGGCGTT GGCCGATGTG
GAGCCGGAGA TTCGTCGGAT TCTGGAGAGA ACCGAAACCC GGGATGCGCT GGCAGCCCGT
GTTGATGAGC TCGTGGCTCA GCTTGAATCC GGTACCAGTG CTGACGAACT TGGTGTCGGT
GAATGGCAGC AGTTTGAAGA CCAGGGCCGG AGTGTGTCTG GCCTGAGCCC GCGCGTGGTG
CAGGAAGTGT TTTCCATGGC CCGCCCGGAT GGTGACTCGC CAACCGTTGG CCGCGCCGTG
ACGGCCGATC AGGCTGCTGT CATTGTCCTG ACCGGGGTCA ACGAAGGTGA GGTTGATCAG
GAAGGTGCGG AATACCAACA GCTGATGCGT TTCCTGGCGC AGCTTGAGGG GCAGCGTGAA
TATACCGCCT ACCAGCAGTA CCTTCGCAAT ACAGCTGAGG TTGAGCGGAA CTGA
|
|---|
| Protein sequence | MLQDIRDNAQ STIAKVIVGL LIISLSIWGM DAIIGGFTGE PEVATVNGQD ITEREFLRTV
QMESQQRLMQ MENRDQSLLD EDQIRRDVLD ALIREAVLTQ DAQSQGLELT DADIDSLITQ
MPQFQVDGQF NRDRFVATVR NVGMGVAEFR ESIRKNYVVN QIRAAIAQTG VVAPENAAHL
LAIQNQTRDF RVLTLDGSSV QDQVDVTEAD VQAYYDENLN QFRQPEQVDA AYITLSQGAL
AESIEVAEDE LRTYYEERAE EYAREERRAA HILVEAGDEG QATLATIQQR LEKGESFAVL
AEEYSVDTVS AQEGGDLGFA GRGVYDEAFE DALFGLEEGE VSGPVETSFG LHLIKLEEVR
RSDVPAFDEL REDLRLELAR TKASERFAEV RSQLADAAYA ADDLAGPAEE LGLEIRVVEG
VSRDGGAAPF DHAGLVRQLF SEDVLEGGYN TELIDVGDNV SVVARVREYH EPRQLALADV
EPEIRRILER TETRDALAAR VDELVAQLES GTSADELGVG EWQQFEDQGR SVSGLSPRVV
QEVFSMARPD GDSPTVGRAV TADQAAVIVL TGVNEGEVDQ EGAEYQQLMR FLAQLEGQRE
YTAYQQYLRN TAEVERN
|
|---|
| |