| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1827 |
|---|
| Symbol | glpD |
|---|
| ID | 4656540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 2035462 |
|---|
| End bp | 2037003 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639811793 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_959096 |
|---|
| Protein GI | 120554745 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.17112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAATA ACAAAGGACT GGTTTCAGGC AACTCTCACA CTCCCCCCAC GCAATGCGAT
GTTCTGGTGG TCGGGGGCGG CGTAAACGGC ACCGGAATTG CCATGGACGC CGCAGGCCGG
GGGCTTCGGG TTGTTCTGTG TGAGATGAAC GATCTTGCCT CTGCCACTTC GTCCAGCAGC
AGCAAACTTA TCCACGGCGG TCTGCGCTAT CTTGAGCATT ACGAATTCCG GCTGGTCAGG
GAAGCACTCG GTGAACGGGA GGCCCTGCTA CGAAACGCCC CCCACATCAT GTGGCCGATG
CGTTTTCGCC TGCCCCATCA GCCCCACCTG CGACCAGCGT GGATGATCCG TACCGGCCTT
TTCCTCTACG ATCATCTGGC CAAGCGCGAA CTGCTGCCCG GCTCCCGGTC TATTACCTTT
GGCCCGGACT CGCCCCTGAA ACCAGACATC AGCCGTGGAT TCGAGTATTC GGATGGCTGG
GTTGATGATG CCCGGCTGGT GGTACTGTCT GCTCGCAAGG CCGCTGAAAA AGGCGCAACC
GTATTGACCC GCACCCGCTG TAGCCGCGCC GAGCGCCGTA ACGGGCAATG GCACGCCACC
CTGGACGATC ACCACCGGGA CAAGCAGTAC AACATCCGCG CCAAGGTGGT CGTTAACGCC
ACCGGCCCCT GGGTCAGTAG CCTGTTCGGT GAAAGCCTGT CTATGCCAGC TCCCAAGCAG
ATCCGCATGG TCAAGGGCAG CCACATCGTG GTACCCAGGC TCAATCAGGA TACCGAAGCC
TATATTCTTC AGAATCAGGA CGAGCGCATT GTTTTCGTGA TCCCCTACGA GGACCGCTTC
TCCCTGATCG GCACCACCGA TGTCGATTAC GTGGGCGATC CGTCGCAGGC ACGGATTTCC
CCAGAGGAAA CCGACTATCT GCTGTCGATC GTCAACCAGT ATTTCCGCCG GCAACTGTCC
GCCAACGATG TAGTCTGGAG TTACTCCGGT GTTCGGCCGC TGATGGACGA CGAGGGTGGC
ACCGCACAGT CTGCCTCTCG CGACTACTCA TTCGAGGTTG ATGATGAGGA CTCGCTGCCC
CCTTTGATCT CGGTATTCGG GGGCAAGATC ACTACCTACC GGAAGCTCGC CGAAGCTGTG
ACCGATCAGG TCAGTCGCTA TTTTCCCGGC TCCGGCCGAT CCTGGACCCG AACGGCCGTG
TTGCCCGGCG GCGACTTCAA CACTCAGGAG CAACTGGCCA CCGAACTCGC AGCCGATTTC
CCCTGGCTGG ACGATGCTGT AATCCATCGG TTTGTGCGAA GCTATGGCAC CAGCAGCTAC
AACATTCTGG AAGGCTGTCA GAACATGGCC GATCTCGGCC ACTGGTTTAC CGATACCCTG
TCTCGTCGCG AGGTGGATTA TCTGATGACC CACGAATGGG CGATCACACC AGAGGACCTG
CTCTGGCGGC GAACCAAACA GGGCCTGTAC ATTAACCCGG AACAATACAG CGAGCTATCT
GAGTATATGG CCCGGAGTGG CCAGGTCAGT CCAGAATGCT AG
|
|---|
| Protein sequence | MANNKGLVSG NSHTPPTQCD VLVVGGGVNG TGIAMDAAGR GLRVVLCEMN DLASATSSSS
SKLIHGGLRY LEHYEFRLVR EALGEREALL RNAPHIMWPM RFRLPHQPHL RPAWMIRTGL
FLYDHLAKRE LLPGSRSITF GPDSPLKPDI SRGFEYSDGW VDDARLVVLS ARKAAEKGAT
VLTRTRCSRA ERRNGQWHAT LDDHHRDKQY NIRAKVVVNA TGPWVSSLFG ESLSMPAPKQ
IRMVKGSHIV VPRLNQDTEA YILQNQDERI VFVIPYEDRF SLIGTTDVDY VGDPSQARIS
PEETDYLLSI VNQYFRRQLS ANDVVWSYSG VRPLMDDEGG TAQSASRDYS FEVDDEDSLP
PLISVFGGKI TTYRKLAEAV TDQVSRYFPG SGRSWTRTAV LPGGDFNTQE QLATELAADF
PWLDDAVIHR FVRSYGTSSY NILEGCQNMA DLGHWFTDTL SRREVDYLMT HEWAITPEDL
LWRRTKQGLY INPEQYSELS EYMARSGQVS PEC
|
|---|
| |