| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1767 |
|---|
| Symbol | |
|---|
| ID | 4657405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 1969760 |
|---|
| End bp | 1970770 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639811733 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_959036 |
|---|
| Protein GI | 120554685 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.406374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTT CCCGTGTTGA TCTGAACCTG CTTGTGTACC TGGATGTGCT GTTGCGGGAG
CGCAATGTAA CCAAGGCGGC TAATCACCTT GGCATCACTC AGCCGGCCAT GAGTAACGGT
TTGCGGAGGC TGCGGGATCT GTTTGGCGAT CCCCTGCTGG TGCGAACCAG TGAAGGCATG
ACGGCCACCG AGCGGGCCAG GGAATTGCAG CCACTGGTTC GCGGGATTCT ATCGGATATC
GAGCAGGCGG TGCAGGAAAA AACGCCATTT GCGGCCGGTG AGAGCCAGCG GGTGTTCCGG
ATCATGGCCA GTGATTACGC GGAATCCTGC CTGATGCCAC GGGTGTTGCG CCGTATCCGA
CAGGAAGCAC CGCATGTCAC GCTGGATGTT CTGACGCCCA GTGATGTCAG TTTTCTGGAT
GTGGAGCAGG GTCGCCTGGA CATGGCGATT AACCGTTTCG ACAAGATTCC CCAGTCATTT
CATCAGAAAA CCCTCTGGAC GGAATACTTT GCGTGCCTGA TGAACGCCCG GAACCCGATC
CTGAAAGAGC CGTTTACACT GGATACCTAT CTGGACGCCA GTCATATCTG GGTCAGCAAG
ACCGGTTTTG GTGTCGGGGT GGGGGTGAAT CCGAAGGATG TTCAACGCCT GGGCTGGGTG
GACGAGGCAC TGGGCAGAAT GGGGCGCAAG CGCCAGATTT CCGTGTTTAC GCGCCATTAT
CAGGTGGCGA TGCTGCTGGC GGAACAACAC GATCTGATCG CCACGCTGCC ATCGAGAGCA
GCCTGGCTGC AAAAAGATAA TCCAAATCTG GTGGTTAAGG TGCCGCCTTT TGAGATTCCG
CCCTTTGAAC TCAAGATGGC CTGGAGCCCG CTGCTGCAGC ACAACTCGGA CCATCAGTGG
CTGCGCAAAC TGATTGTGGA AGTGGCGGAA GAAGTGGATG AGGAATTTGC GCCATTCGGG
GCCAGTTTCG AGTCACCTCA GGCGGTTCAG GTGTCCCACT CAGAGCGGTA G
|
|---|
| Protein sequence | MDISRVDLNL LVYLDVLLRE RNVTKAANHL GITQPAMSNG LRRLRDLFGD PLLVRTSEGM
TATERARELQ PLVRGILSDI EQAVQEKTPF AAGESQRVFR IMASDYAESC LMPRVLRRIR
QEAPHVTLDV LTPSDVSFLD VEQGRLDMAI NRFDKIPQSF HQKTLWTEYF ACLMNARNPI
LKEPFTLDTY LDASHIWVSK TGFGVGVGVN PKDVQRLGWV DEALGRMGRK RQISVFTRHY
QVAMLLAEQH DLIATLPSRA AWLQKDNPNL VVKVPPFEIP PFELKMAWSP LLQHNSDHQW
LRKLIVEVAE EVDEEFAPFG ASFESPQAVQ VSHSER
|
|---|
| |