| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1662 |
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| Symbol | prpD |
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| ID | 4654440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 1865172 |
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| End bp | 1866650 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639811627 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_958933 |
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| Protein GI | 120554582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.414028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCCA CTTACGATCT CAACGAACGC CCGGACTACG ACGACGTACT GCAACAAATC
GCCGACTATG CCCTTGATTA CCGCATAGAA AGCGAAGAAG CCTGGGAAAC CGCCCGTTAT
TGCCTGATGG ACACCCTGGG CTGCGGTTTG CTGGCGTTGC GTTTTCCGGA ATGCACCAAA
CACCTGGGCC CGCTGGTGGA AGGCACGATC GTTCCCCACG GTGCCCGGGT GCCTGGCACT
CCATACCGCC TGGACCCGGT GAAAGCCGCC TGGGACATAG GCTGTATCGT CCGCTGGCTG
GATTACAACG ATACCTGGCT GGCGGCCGAA TGGGGCCACC CCTCCGATAA TCTCGGCGCC
ATTCTTGCGG TTGCCGACCA TCTTTCTCAA AAACGCGTTG CCAATGGCCA GGCGCCACTG
GCCATGAAGG CCGTTCTTGA GGCCATGATC CTGGCCCATG AAATTCAGGG TGTACTTGCC
CTTGAGAACT CGTTTAACCG GGTAGGGCTG GATCATGTTG TGCTGGTGAA GGTGGCGTCG
ACCGCCGTCA GTGCCAAACT GATGGGCGCC AACCGGGAAC AGATGCTCTC CGCGCTGTCA
CATGCCTGGG TAGATGGCCA GGCCCTGCGG ACCTATCGCC ACGCGCCTAA CGCCGGTTCC
CGTAAATCCT GGGCGGCAGG CGATGCCACC TCTCGGGGTG TTCGCCTGGC AGATATTGCC
ATGCGAGGGG AGATGGGCAT TCCCGGGGTG CTGACGGCGC CACAATGGGG CTTCTACGAC
GTCCTCTTCA GCAAGACCAA TCGAGATCAG GCCCTGAAAC CCGAATCATC ACGCCGCTTC
GCCTTAGCAC AGCCTTTCGG CTCCTACGTG ATGGAAAACA TCCTGTTCAA GATCTCGTTC
CCGGCAGAGT TTCATGCCCA GACCGCCGCC GAGGCCGCAG TAACACTGCA CCCACAAGTG
AAGGGCCGAC TGGAAGACAT TGATCGCATA GAGATTACCA CCCACGAGTC GGCTATTCGC
ATTATTTCCA AGCAGGGCAA ACTCGCTAAT CCGGCAGACC GGGATCACTG CCTGCAGTAC
ATGACGGCGG TGCCACTGAT CTTTGGCAAT CTGACGGCAG AGCATTACGA AGACAGCTTT
CACCAGGCCC ATCCAGAAAT CGACCGCCTG AGAGAAAAAA TGCAGGTCAT CGAGGATGAA
CGATATACCC GCGAATACCT CGAGGCCGAT AAACGATCAA TCGCCAATGC GATACAGGTT
TTCTTCAAGG ATGGCTCCAG TACCGACAAG GTTGCCGTGG AATACCCGAT AGGGCACCGA
CGCCGGCGCA AGGAAGGTAT GCCGCTGCTG GTGGAGAAAT TCCTGGCCAA TCTTCAGACA
CGCTTTCCTG CCCAACAATG CGACGCCATT ATGGACAGTT GTGCTAGTCT GGGGCGGCTT
GAGGTGATGC CGGTGCACGA GTTTGTGTCG CAACTATAA
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| Protein sequence | MSATYDLNER PDYDDVLQQI ADYALDYRIE SEEAWETARY CLMDTLGCGL LALRFPECTK
HLGPLVEGTI VPHGARVPGT PYRLDPVKAA WDIGCIVRWL DYNDTWLAAE WGHPSDNLGA
ILAVADHLSQ KRVANGQAPL AMKAVLEAMI LAHEIQGVLA LENSFNRVGL DHVVLVKVAS
TAVSAKLMGA NREQMLSALS HAWVDGQALR TYRHAPNAGS RKSWAAGDAT SRGVRLADIA
MRGEMGIPGV LTAPQWGFYD VLFSKTNRDQ ALKPESSRRF ALAQPFGSYV MENILFKISF
PAEFHAQTAA EAAVTLHPQV KGRLEDIDRI EITTHESAIR IISKQGKLAN PADRDHCLQY
MTAVPLIFGN LTAEHYEDSF HQAHPEIDRL REKMQVIEDE RYTREYLEAD KRSIANAIQV
FFKDGSSTDK VAVEYPIGHR RRRKEGMPLL VEKFLANLQT RFPAQQCDAI MDSCASLGRL
EVMPVHEFVS QL
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