| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1560 |
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| Symbol | |
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| ID | 4656625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 1743429 |
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| End bp | 1744337 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639811525 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_958831 |
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| Protein GI | 120554480 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.949883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCCTCA CGCCTCAGCC TCTCACCACA GATACCGCCA TTGGTAATGG ACGGGTTGCC
ATCATCTTTG AGTACGACGG TCAGGCCTTT CATGGCTGGC AATTGCAGAA GAGTGGCGTG
CGTTCGGTGG AGGCAGAACT TTCCCGGGCC GCGGCCCGCG TTGCTGACCA TCCGGTCGAC
CTGGTGTGTG CAGGCCGCAC CGACGCCGGC GTGCATGCCA GTTTTCAGGT AGCCCATTTT
GACACGCCAT CGGTTCGAAA CCTTCGTTCC TGGGTCATGG GAATGAACAC GGCATTGCCT
GATGACATTT CTGTGCACTG GGCAGGGAAC GGCCAGGGCG ATTTTCACGC CAGGTTTTCC
GCGATTTACC GACGTTACCG GTATGTGATC TACAATCATC CGGTGCGCCC GGGGATCCAG
CGTGGACAGG TGTCCTGGAC CTTTCGTCCG TTGGATGCCG AAAGAATGCA TCGTGCATCC
CAGGCACTGG TCGGCGAGCA TGACTTCTCC TCATTTCGCG CTGCCGGTTG CCAGTCCCGG
ACTCCGGTTC GGTTTCTGGA GCAGATTTCG GTAACCCGAT GCGGAGAGTT TGTCGTAATA
GATGTGCAGG CCAACGCCTT TCTTCATCAT ATGGTACGCA ATATTGCCGG TGCCTTGATG
GCGGTTGGTA ATGGTCAGCA GCCTGAAGAC TGGATTGGTG ATATTCTGGA GTGCCGTGAT
CGCAAACTTG CCGGTGTGAC CGCCCCTCCT TACGGGCTCT ACCTGGTGGA TGTCGGTTAT
CCTGAATCCT TCGGGATTCC CAAGGCATTG TGCGGACCGG CGTTCGTTAC TCCCTGGTTT
GACCCGGCCA GCAACGCGCC GATCACACCA ACTCACATAC ACCCGAAACA GGGGAAGGCT
CCTGCATGA
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| Protein sequence | MFLTPQPLTT DTAIGNGRVA IIFEYDGQAF HGWQLQKSGV RSVEAELSRA AARVADHPVD
LVCAGRTDAG VHASFQVAHF DTPSVRNLRS WVMGMNTALP DDISVHWAGN GQGDFHARFS
AIYRRYRYVI YNHPVRPGIQ RGQVSWTFRP LDAERMHRAS QALVGEHDFS SFRAAGCQSR
TPVRFLEQIS VTRCGEFVVI DVQANAFLHH MVRNIAGALM AVGNGQQPED WIGDILECRD
RKLAGVTAPP YGLYLVDVGY PESFGIPKAL CGPAFVTPWF DPASNAPITP THIHPKQGKA
PA
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