| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1545 |
|---|
| Symbol | |
|---|
| ID | 4656610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1726320 |
|---|
| End bp | 1727399 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639811510 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_958816 |
|---|
| Protein GI | 120554465 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGTA AGAAACTGGA AAACCTGAAC GTGGCCAGCC AGGAAACACT GATCACTCCT
GAAGCACTGA AGCAAGAGAT GCCACTGTCA GACAAGGCAG CCGAAACCGT TGCCAATGGT
CGGCAAGCCA TCTACGACAT TATGGATGGC AAGGATCATC GTTTGTTCAT TGTCGTAGGC
CCCTGCTCGA TTCACGATGT AGAAGCTGCC CGCGATTATG CCGCCCGACT GAAAAAGCTC
GCCGATGAAG TCAGCGATAC ACTGTTGATC GTCATGCGCG TGTACTTCGA GAAGCCACGC
ACCACCGTAG GCTGGAAAGG CCTGATCAAC GATCCGCACC TGAATGATAC CTTTGATATC
GAGCAGGGAC TGCACATTGG TCGCCGGCTG CTGCTGGACA TCAATGAGAT GGGCCTTCCG
GCCGCCACTG AAGCCCTGGA CCCAATATCT CCCCAATACC TTCAGGACAC CATAGCCTGG
TCTGCTATCG GTGCCCGTAC CACCGAGTCC CAGACCCACC GGGAAATGAG CAGCGGCCTG
TCCATGGCCA TCGGCTTCAA GAACGGCACC GATGGCAGCC TCGACGTTGC GGTAAACGCC
ATGAAGTCAG TCTCTCATCC CCACAGCTTC CTGGGCATCG ACCAGCAGGG CAAAGTTGCC
ATTATTCGCA CCAAGGGCAA CAACTACGGC CACGTCGTGC TTCGTGGTGG TGGCGGCAAG
CCAAACTACG ACTCCGTCAG CGTAGCCTTG TGTGAACAGG CACTGGATAA GGCCAAGCTG
CGCAAATCCA TCATGGTGGA TTGCAGTCAC GCCAACTCCA GCAAGGATCC GGCTATTCAG
CCTTTGGTAA TGCAGGATGT GACTCACCAG ATTCTGGAAG GCAATCAGTC TATCCAGAGC
CTGATGGTGG AAAGCCACAT CAACTGGGGT AGTCAGTCTA TTCCGGAGAA CCTGGCTGAC
CTGAAATACG GCGTATCCAT CACCGACGCC TGTATCGACT GGGAAACCAC CGAAAAAGCC
ATTCGCGACA TGCGTGAGAA GCTTAAAGAC GTTCTGCCCA AGCGGACCGC CTCTGCCTGA
|
|---|
| Protein sequence | MSGKKLENLN VASQETLITP EALKQEMPLS DKAAETVANG RQAIYDIMDG KDHRLFIVVG
PCSIHDVEAA RDYAARLKKL ADEVSDTLLI VMRVYFEKPR TTVGWKGLIN DPHLNDTFDI
EQGLHIGRRL LLDINEMGLP AATEALDPIS PQYLQDTIAW SAIGARTTES QTHREMSSGL
SMAIGFKNGT DGSLDVAVNA MKSVSHPHSF LGIDQQGKVA IIRTKGNNYG HVVLRGGGGK
PNYDSVSVAL CEQALDKAKL RKSIMVDCSH ANSSKDPAIQ PLVMQDVTHQ ILEGNQSIQS
LMVESHINWG SQSIPENLAD LKYGVSITDA CIDWETTEKA IRDMREKLKD VLPKRTASA
|
|---|
| |