| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1533 |
|---|
| Symbol | |
|---|
| ID | 4654848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 1712538 |
|---|
| End bp | 1713248 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639811498 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_958804 |
|---|
| Protein GI | 120554453 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.159798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGA TCGTACTGGA TACCGAAACC ACGGGTATTG ATCCGAACGA AGGTCACCGC
ATTATCGAAA TTGGTTGCGT GGAAGTGATC GAGCGCGAGC TGACCGGTCG CAACTACCAC
GTATACATTA ACCCTGAGCG GGAGGTAGAA GCGGAGGCTA TCACCGTTCA CGGTATCACC
AATGAATTTC TGGCCGACAA GCCAAAGTTT GCGGAGGTTG CCGACGAGTT CTTTGAGTTC
ATCAAGGGTG CAGAGCTGGT CATCCATAAC GCCGCGTTCG ACGTGGGCTT CATGGACTCC
GAATTCGCCC GCCTGAAACC GGTTCGGAAA ACAGCAGACC ACTGCGGCAT TGTCGATTCA
CTGGCCATTG CCAGGAAAAA GCACCCGGGC CAGAAAAACA ATCTCGACGC CCTGTGCAAG
CGTTATGGAG TGGATAACTC CAACCGTGAC CTTCACGGGG CATTGCTGGA CGCCGAGATC
CTGGCAGACG TCTATCTGCT GATGACCGGC GGCCAGACCG CGCTGTCCCT GGATGCCGGC
TCCGGCGATG AAGGTGGCGA TGGCGGTATT CGCCGAATCT CCGGTGAGCG CGCGCCGTTG
GCGGTGGTTC GGGCCACCAG TGATGAAGCC TCTGCCCATG ATGAGTTCAT GGCGATGATG
GAGAAGCAGG CCGGCGAAAC GGTGTGGTCC CGGTTGCAGG CAACAGAATG A
|
|---|
| Protein sequence | MRQIVLDTET TGIDPNEGHR IIEIGCVEVI ERELTGRNYH VYINPEREVE AEAITVHGIT
NEFLADKPKF AEVADEFFEF IKGAELVIHN AAFDVGFMDS EFARLKPVRK TADHCGIVDS
LAIARKKHPG QKNNLDALCK RYGVDNSNRD LHGALLDAEI LADVYLLMTG GQTALSLDAG
SGDEGGDGGI RRISGERAPL AVVRATSDEA SAHDEFMAMM EKQAGETVWS RLQATE
|
|---|
| |