Gene Maqu_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_1478 
Symbol 
ID4657215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp1662947 
End bp1663438 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content51% 
IMG OID639811443 
Productanti-sigma-factor antagonist 
Protein accessionYP_958750 
Protein GI120554399 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTT ATAAAATCCT GCAAGCAGAA CAGCAGGGAA TATACGTCCT GAAGTTTATT 
GGGGAAATCC GGCTGAACCT GTGTTCGACG CTGGACAATC TGGTTGAGTC CATAACCCGT
GATCCGGCAT TCAAAACCGT GGTTATCGAC CTCACCGAGA CCGAAATCAT CGACAGCACG
ACGCTTGGCC TGCTGGCCAA GATTGCGCTG GCGGCGCAGA AACAAAGTCA TTTTCTGCCA
ACGCTGATTT CCACCAACCC CGATATCACC CGCATTATTA CGTCCATGGG CTTCGACAAG
ATTTTCATTA TTGTCCGTGA GCCAGCTTCC CGAATTGAAG AACTCGAAGA AATCCCCGTG
CTCAAGGCGA GCGAGCAGCA GGTTCGCGAT AAAGTTCTTG ATGCCCATAA AGTACTGATG
GGCATGAATA GCCGGAACAG GGAAGAATTC AAGAATCTGG TGCGGGCCCT GGAATGCGAG
GAAACTGGCT GA
 
Protein sequence
MAGYKILQAE QQGIYVLKFI GEIRLNLCST LDNLVESITR DPAFKTVVID LTETEIIDST 
TLGLLAKIAL AAQKQSHFLP TLISTNPDIT RIITSMGFDK IFIIVREPAS RIEELEEIPV
LKASEQQVRD KVLDAHKVLM GMNSRNREEF KNLVRALECE ETG