| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1466 |
|---|
| Symbol | |
|---|
| ID | 4657203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1651527 |
|---|
| End bp | 1653146 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639811431 |
|---|
| Product | ABC transporter, transmembrane region, type 1 |
|---|
| Protein accession | YP_958738 |
|---|
| Protein GI | 120554387 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAC TGAAGCCCTG GCTGGCGCTG ATTTTCCGTC GCAAAAGTCG CCTTACGGTT
GGTGCCGGCT TGCTACTGGG CACCCTGCTT TCCGGTATCG GTCTGCTAGC GTTGTCTGGC
TGGTTTCTGA CCGAAACCGC GCTGGTTGGC CTGTTGCTGG CGGCAGGGAT ACAGGCCTAC
ATCAATCTTT ATGTGCCGGG CGGTGGTATC CGTTTTTTTG CGGTGTCCCG AACGGTGTTC
CGGTATCTGG AACGCGTGTA CAACCACAAC ACGGTACTGC AGCTACTCAC CGATATTCGG
GTGGCCCTGT TTGACCGATT GGCGGCCCGG CCACGAACAG AGCGCAGTTC CCGTTCCGGC
GCGCAGTGGC TTTCCCGGCT CACAGCCGAT GTCGATGCGC TGGACACGCT TTATCTCAGG
CTGATTGCCC CCGCCGCCCT GGCAGCCGTG GTTACCCTAC TGCTTGCCGC AATGGCGTGG
TTACTGTTTG ATGGTGTTGT GGCGCTGATT CTGGTGGTGA TTCTGTCGCT TTCGTTCCTC
CTGTCCACCT GGCTGGTGTA TCTACGAACT TACGCTGCCT CCGGACAGTT GAGCGATCAG
CAGGAGAGCC TGCGAGGCGA ACTGGTTGAG CATCTTGAAG GCTTTGCGGA ACTTACCGCC
GCTGGCCGCA CGGGTAAGCA CACGGCCCGG CTGATGCGTC GAAGCGTAGA ACTTTCCAGG
GATCAGGCCC GGATCGACAG CCGAACCGGC TGGCATCAGG CTGGCTCTCA TCTGCTGATC
AATGTCGCGG CGGTGGCAGC CTTGTGGCTG GGCTTCCGCC TGTTCGAGCA AGGCAATCTG
AGCGGCCCGG TACTGGTTAT CCTGCCCATT GCCCTGCTGG GCCTGGCCGA AGTCTACGCC
ATGCTCCCGG ATGCCTTTGG CAAACTGGGA GCAACTCGAG CTGCTGCGCG CCGCCTGAAC
TCCGACCACG GTCTGGAAAG GGCCGCGGCA TCACCCGCTG GTTCTGCTGG CGAACTGCCG
GAGGGCTTCT CTCTTCAGGC CTGCGATATC ACCGTGGGTT ACGCGGGTTA TTCGCCCTTA
CTCAGTCACT TCACGCTGAC GCTTCGCCCG GGCGACACCG TGGGTATCGT TGGCGTCTCC
GGCAGTGGCA AATCCACCCT GGCAGATACC CTGGCCGGGC TGGCAGAGCC ATGCCGGGGA
GAACGTCATT CCTTGCCCTG CGCCTACCTC ACGCAAGCGA CCGTGGTGTT TGAAGACTCC
GTGAAAGCGA ACCTTCAGTT GGCAAACCCC AACGCCGGGG ACGGTGATAT GTGGCGGGTA
CTGGAGATAG TCGAACTGGC GGAACGGTTC GCCCAGGACG CTGAAGGATT GGGTACCTGG
CTGGGCAGCG CCGGCAACCG TTTATCTGGC GGGGAGGCCC GGCGCCTGGT GCTGGCCAGG
GTTTTACTGA GTCAGGCACC CGTGGTGATT CTGGATGAGC CTTTCACTGG TGTGGACGAG
GCAACCCGTA AACGGATTTC GCCCCAGATC AGCCGTTGGC TGCAGGGGCG CACCGTGGTG
TGTCTCGGGC ACGGGCCGGA CGCCCTGCTG GCCTCCGACC GTATTCTGCA CCTGGGTTGA
|
|---|
| Protein sequence | MPELKPWLAL IFRRKSRLTV GAGLLLGTLL SGIGLLALSG WFLTETALVG LLLAAGIQAY
INLYVPGGGI RFFAVSRTVF RYLERVYNHN TVLQLLTDIR VALFDRLAAR PRTERSSRSG
AQWLSRLTAD VDALDTLYLR LIAPAALAAV VTLLLAAMAW LLFDGVVALI LVVILSLSFL
LSTWLVYLRT YAASGQLSDQ QESLRGELVE HLEGFAELTA AGRTGKHTAR LMRRSVELSR
DQARIDSRTG WHQAGSHLLI NVAAVAALWL GFRLFEQGNL SGPVLVILPI ALLGLAEVYA
MLPDAFGKLG ATRAAARRLN SDHGLERAAA SPAGSAGELP EGFSLQACDI TVGYAGYSPL
LSHFTLTLRP GDTVGIVGVS GSGKSTLADT LAGLAEPCRG ERHSLPCAYL TQATVVFEDS
VKANLQLANP NAGDGDMWRV LEIVELAERF AQDAEGLGTW LGSAGNRLSG GEARRLVLAR
VLLSQAPVVI LDEPFTGVDE ATRKRISPQI SRWLQGRTVV CLGHGPDALL ASDRILHLG
|
|---|
| |