Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_1340 |
Symbol | |
ID | 4655922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 1516575 |
End bp | 1518509 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639811307 |
Product | ABC transporter related |
Protein accession | YP_958615 |
Protein GI | 120554264 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCCGC GACCGTTGAT TGAGCTTCAA GACATTACCC GATCCTTTGG CGAGGGCGAA CTGGCGGTTC CTGTGCTCAA GGGCATTGAT CTGAAAATCT GGCCCGGTGA GTTTGTGGCC ATCATGGGGC CATCGGGCTC CGGCAAATCT ACCCTGATGA ACATCCTCGG CTGTCTGGAT CAGCCCAGCG CTGGCCAGTA CCGGTTCAAT GGCAGGGACG TGTCTGCCCT GGACCGGGAC GAACTGGCAC GGCTTCGGCG CGATGCCTTT GGTTTTGTGT TCCAGAGCTA TAACCTGTTG CCTGGAATGA CTGCCCGGGA GAATGTTGAG ATTCCGGCAA TTTATGCCGG TATGGCGCCG GCCGAGCGGC ATGCAAGGGC GGAACGGTTA CTCACCGGGC TCGGGCTGGG CGAGCGCCTG TCCCACAGGC CGGCCCAGTT ATCCGGTGGC CAGCAACAGC GAGTGTCAAT TGCCCGGGCC CTGATGAACG GCGGCCAGTT AATCTTCGCA GACGAACCGA CCGGTGCTTT GGACAGCAAA AGCAGCCAGG AAGTGATCCG GCTGTTAACC GATCTTTCCA GACAAGGCCA TACCATCATC TTGATTACCC ACGATCCCGA CGTGGCAAAA GTGGCCCGCC GTCAAATCCG CATTGCCGAT GGTGAGCTTG TTGAGGACAC CGGCGCCGAA ATGCCATCCG CGCAAATACC AGAAACTGAC CAGAATGGCC GTCGCCACTC TCGTCTTGGG GATTGGCAGG AGGCCCTGAA AAGCGCTGTG CGTTCCCTGC ACAGCAACCT GTTTCGGACG GCGTTGACAC TGCTTGGCAT CGTGATCGGG GTTGCCTCGG TGATCACCAT GCTGGCGATC GGGGAGGGGG CCCGAAAGGA TGTCGTCGAC CGAATCAGCA CCATGGGCAG TGATCTGCTG CTGGTGCGCC CGGGTGGTCC CGATCAGCGG GGTGGGCGCT GGAGCGTGAC CACACTGGTG CCATCTGACT TCAAAGCAAT CAATGAGATA GAGGGTGTTC TTGCAGCAAT ACCTGAGCTT ACTGGCGGCC AGACGCTGCG CTATTCCAAC CGGGATCACT CGGCTGAGAT CAATGCCACC TCCTTCCGGT TCCCGGTGGC CCGCCAGTGG CCTGTTGTTG AGGGCACCTT CTTCAGCGCC CAGGATGAAG CCAGTTACGC AGCCGTAGCA GTATTGGGCA AAACCACCGC CAACGCTCTG TTTCCTGACG AAAGCCCCCT TGGTAAACAC CTGATGGTTA ACAACGTGCT GTTTCAGGTG ATTGGCGTGA TGGATGAAAA AGGCGCCTCT CCCATGGGAC AGGACCAGGA CGATGTGGTG TTTGTTCCCT ACACCACGGG CAGCCTGCGC ATTTTCGGGC AAACGCACCT GCGCAACATC ACCGTGGCTG TGGCCGACAT CGACCGTATG GATGAGATCG AAGCCCTCAT TCACGACACT CTGATGGCCC GCCATGGCAT TGAGGACTTT ACTATCCGCA ACATGGCTTC ATTGATTGAA ACCATTTCGG AAACCCAGAA TACACTCACC TGGCTGCTGG GCTCTATTGC AGCAATTTCC CTCCTTGTGG GTGGCATCGG GGTGATGAAT ATCATGCTGG TGAGCGTCAC TGAACGTACC CGCGAAATCG GTATTCGCAT GGCCACCGGT GCCCGGGCGT GGAATATCCT GCAGCAGTTT CTGACCGAGG CCTGGCTGGT ATCGGCCATA GGCGGGTTGA TTGGTGTTGT CATCGGCATT GCCGCAACCC GGATTATTGG CTCTCTGGGC ACACCCATTC ACATGACGCT GCTACCCATG GCTCTGGCCT TTGGTTGCGC TTTTGCCACA GGCCTGCTGT TCGGGTTTCT GCCCGCCCGT AAGGCCGCCC ATCTGGACCC TGTTCATGCC CTGGCCTCGG AGTAA
|
Protein sequence | MSPRPLIELQ DITRSFGEGE LAVPVLKGID LKIWPGEFVA IMGPSGSGKS TLMNILGCLD QPSAGQYRFN GRDVSALDRD ELARLRRDAF GFVFQSYNLL PGMTARENVE IPAIYAGMAP AERHARAERL LTGLGLGERL SHRPAQLSGG QQQRVSIARA LMNGGQLIFA DEPTGALDSK SSQEVIRLLT DLSRQGHTII LITHDPDVAK VARRQIRIAD GELVEDTGAE MPSAQIPETD QNGRRHSRLG DWQEALKSAV RSLHSNLFRT ALTLLGIVIG VASVITMLAI GEGARKDVVD RISTMGSDLL LVRPGGPDQR GGRWSVTTLV PSDFKAINEI EGVLAAIPEL TGGQTLRYSN RDHSAEINAT SFRFPVARQW PVVEGTFFSA QDEASYAAVA VLGKTTANAL FPDESPLGKH LMVNNVLFQV IGVMDEKGAS PMGQDQDDVV FVPYTTGSLR IFGQTHLRNI TVAVADIDRM DEIEALIHDT LMARHGIEDF TIRNMASLIE TISETQNTLT WLLGSIAAIS LLVGGIGVMN IMLVSVTERT REIGIRMATG ARAWNILQQF LTEAWLVSAI GGLIGVVIGI AATRIIGSLG TPIHMTLLPM ALAFGCAFAT GLLFGFLPAR KAAHLDPVHA LASE
|
| |