| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1339 |
|---|
| Symbol | |
|---|
| ID | 4655921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1515424 |
|---|
| End bp | 1516578 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639811306 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_958614 |
|---|
| Protein GI | 120554263 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.611384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCTG CTACCCGTGC CGGGCATCGC TGGCTGAAGT GGGTTGGATT TCTGTGTGTG
CTGTGCGCGA TAGCCTTCGC TGTCGTTTGG TACGCCCGCA ATGCTAACGG CAATGAACCG
GCTTTGAATA CCGTGGCGGT TAGCCGAGGC GACATCCAGA ACCTGGTTTC GGCCACCGGC
GTGCTTGAGC CGAGTAATTA TGTGGATGTG GGTGCACAGG TTTCCGGCCA GCTGGAGCTG
ATTCACGTAC GAGTGGGCCA ACCCGTTAGC ACCGGCGATC TGCTGGCGGA AATCGACCCT
ACCGTGTATG TGGCGAAAGT GGATGCCACC CGCGCCCAGT TGAAGAACCA GCAGGCCCAG
CTAGCCGATC GCAAGGCCCA GCTGCGCCTC GCCGAGATCC AGTTCCAGCG CCAGCAGAAC
CTGTGGCGTG AAGATGCGAC CACACGGGAA TCCCTGCAGA CCTCCGAAGC ATCTTTAGCG
TCCGCCCGGG CGCAGTTGGC CATGCTTGAG GCACAGATAG AACAGACCTC CTCCACCCTG
AGGGCTGAAG AAGCCAATCT GGGTTATGCC CGCATCTATG CGCCGATGGA TGGCACTGTG
GTATCCATCG AAGCCCGCCA GGGGCAAACT CTGAACGCGA GCCAGACCGC GCCGTTGCTT
ATGCGCATTG CCAATCTGAG CACCATGCGG GTGCGGGCCC AGGTGTCTGA GGCCGACGTT
GGCAAGCTGC AAGCGGGCAT GCGGGTGTAC TTCACCACAC TCGGCGATGC CGAGCATAAG
CTCTACGGAG AGTTGCAGTA CATTGAGCCA ACTCCCGAAG TAACCAACAA CGTGGTGCTC
TACAACGCCC TGTTTACGGT GGATAACCAG GAGGGACGGT TGCTGCCCCA GATGACCGCC
CAGGTGTTCT TTATTCAGGA AGAAGCGCTG GACGTATTGC GGGTGCCAGT CAGTGCGGTG
GCGAGAAACC AGGTCAAGGT CCTGGATGCG AAGGGGCAGC CACAGATTCG GGCCATCGAA
ACCGGCATCA GCAACCGCGT ATACGTGGAG GTTCGGTCCG GATTGAATGA GGGTGATCAG
GTGGTTCTTG CAAACCGGGA TCCGCGGGCC GGTCAGGGTG AGAGCCGGGC TGCCTTTCGG
GGTATGCTGA GATGA
|
|---|
| Protein sequence | MASATRAGHR WLKWVGFLCV LCAIAFAVVW YARNANGNEP ALNTVAVSRG DIQNLVSATG
VLEPSNYVDV GAQVSGQLEL IHVRVGQPVS TGDLLAEIDP TVYVAKVDAT RAQLKNQQAQ
LADRKAQLRL AEIQFQRQQN LWREDATTRE SLQTSEASLA SARAQLAMLE AQIEQTSSTL
RAEEANLGYA RIYAPMDGTV VSIEARQGQT LNASQTAPLL MRIANLSTMR VRAQVSEADV
GKLQAGMRVY FTTLGDAEHK LYGELQYIEP TPEVTNNVVL YNALFTVDNQ EGRLLPQMTA
QVFFIQEEAL DVLRVPVSAV ARNQVKVLDA KGQPQIRAIE TGISNRVYVE VRSGLNEGDQ
VVLANRDPRA GQGESRAAFR GMLR
|
|---|
| |