| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1333 |
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| Symbol | |
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| ID | 4655915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 1509627 |
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| End bp | 1511354 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639811300 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_958608 |
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| Protein GI | 120554257 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.76071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA AGAAGGACAG ATCGTCGTCA TCGTCACAAT CGGAGCAAAG TGAACAAAAG
TTCCATGAGT TGATTGAGAG CCTTCCGATG GTTGCCGTTC AGGGCTACGA CCGGAATCGG
AGGGTCATCT ACTGGAATGA AGCCAGCACA AGACTATACG GGTACTCCAG AAATGAGGCT
CAGGGAAAAC GGCTGGAGGA CCTGATTATT CCGAAAGCCA TGCGCGAAGC CGTCATTGAG
GCCCACACCA ACTGGCTCGA TCACAACATC AGCATTCCCG CAGAAGAACT GGCACTGAAA
CACAAGGATG GCCACCTGGT TCCCGTTTAC TCCAGTCATG TCATGATCAA ACAGGATACC
GGCGAGTGCG AAATGTTCTG TATCGACATC AGCCTGGAAG AACAAACGCA AACCAAGGCA
GAACTGGTTC GCCGCGCCAG CTTTGATGAT CTTACCGGGT TACCCAACCG ACGCCTGATG
GAATCTGAGC TTGAAAGCCG GCTGGCCGAA GCAGATCGCT GCAATCGCGA AGTTGCAGTG
ATCTTCATGG ACCTGGACAA CTTCAAACTG ATTAACGATA CCCTCGGCCA CTATCAGGGC
GACTCCCTCC TCAAATCGGT TGCTGACACC TTAAAGCAGG AATTGCGACA CAGCGATCTG
CTCTGCCGTT TCGGAGGCGA CGAATTCGTT CTGTTACTGT TCGATTTCCA TGGCCCTGAG
GGCATTCATG AATTACTTCA ACGGCTGGTC AAGGCACTCG AAAGCAAGGT GCAGCTTCAC
GGTGATTGCT ATCAGGTATC GGCAAGTTTT GGCGTCAGCC TGTACCCACA CAATGGCGGC
ACCGCAGCGG AACTCATGGG CAACGCAGAC GCGGCCATGT ACCGCGCCAA GGAGATCGGA
AAGAATACAG TCTGCTTCTA CACCTCTGAT ATCAACGACC GGCTCGTCAA ATACCAACAG
ATTACCGCCC TGCTCCGACA GGCACTGACG AACGGCGGAT TGGAACTTTA CTACCAGCCA
CAAATAGATC TGAGAACTGG CGGGGCCACC TCCTGCGAGG CGCTGTTGCG GTGTTTCGAC
AAGGCATCAA ACCTTGTCTC GCCGGCGACG TTCATCCCTG TTGCTGAAAA ATCGGGGCTT
ATAAACCGTA TCGGTGACTG GGTCATCGAT GCCGCATGCA AGCAGCTCAA AGCCTGGCAG
CGAACTGAGC TCGCGGGCGT ACGCATTGAC GTCAATCTGT CCGGTCGCCA ACTGACCAAT
CCACACCTGG CTGACCAGAT CCTGGAAACC ATCGAACACT ATGGTTTGAA ACCTGAGCAA
CTCGGGGTAG AACTCACGGA AAACGAGGTG TTTGGCAGCG AAGAAGACCA AACCAGGCAA
CTGGAGCGCC TCAAGGCTGC CGGGCTCCAT ATATCCATTG ACGACTTCGG CACCGGATAC
TCTTCCCTGG TTTATCTTCG GAAGCTCCCG GTATGCAGCA TCAAGATCGA TCGAAGCTTT
CTTCACTATG CCATGGAAAA CGAAAGCGAC ATGGCCATCA TGAAAGCCAT GGTTACGGTC
GGCCAGAGTC TCGGGTTGAG CATTCTTGTA GAAGGTGTAG AGACCGAGCA ACAGGCAAAG
CTGATACGGG ATCTCGGATG CGATTTCGCC CAGGGCTTTC TTTACGCCAA ACCAATGCCG
GCGAAAGCGG CAGAGGCATT TATGAAGCCC CTGGCTTCAC GCAGTTAA
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| Protein sequence | MDKKKDRSSS SSQSEQSEQK FHELIESLPM VAVQGYDRNR RVIYWNEAST RLYGYSRNEA
QGKRLEDLII PKAMREAVIE AHTNWLDHNI SIPAEELALK HKDGHLVPVY SSHVMIKQDT
GECEMFCIDI SLEEQTQTKA ELVRRASFDD LTGLPNRRLM ESELESRLAE ADRCNREVAV
IFMDLDNFKL INDTLGHYQG DSLLKSVADT LKQELRHSDL LCRFGGDEFV LLLFDFHGPE
GIHELLQRLV KALESKVQLH GDCYQVSASF GVSLYPHNGG TAAELMGNAD AAMYRAKEIG
KNTVCFYTSD INDRLVKYQQ ITALLRQALT NGGLELYYQP QIDLRTGGAT SCEALLRCFD
KASNLVSPAT FIPVAEKSGL INRIGDWVID AACKQLKAWQ RTELAGVRID VNLSGRQLTN
PHLADQILET IEHYGLKPEQ LGVELTENEV FGSEEDQTRQ LERLKAAGLH ISIDDFGTGY
SSLVYLRKLP VCSIKIDRSF LHYAMENESD MAIMKAMVTV GQSLGLSILV EGVETEQQAK
LIRDLGCDFA QGFLYAKPMP AKAAEAFMKP LASRS
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