Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_1255 |
Symbol | |
ID | 4655608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 1412748 |
End bp | 1414235 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639811224 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_958532 |
Protein GI | 120554181 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0685984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGCACG CTAAAACATG CCAGCGCCCC ATCAGCCTCG AAAGACGGCT TGCGGCAACT TACCTGGTAG CTGGTCTGGT CACCGCCGGT CTGGCCGGCT GCGCCGCCGG CCCTGATTTT CAGCGTCCCA CCGCACCCGA TGTGGCTCGC TACACTGCAA CACCGGTAGC TGATAGAACC GTGTCCGCTC CCACGCAGTT CGGCGAAACA CAACGTCTAG TCGAAGGGCT TCCGATCGAA ACGCAATGGT GGCAAAGCTT GGGTTCATCC GCACTCGACG GACTGATAAA CGAAGCTTTC CATGTCAGCC CGACGCTGGC GAGCATCAGC GCCAATTTGC GACAGGCGCA GGAGCTTCTT GCCGCACAGG CGGGCTCGAC GCAATATCCA CAGGTAGATG TCGCACTGGG ATCTCAGCGC CAGCAAATGA GTCCCAGTAG CCAAGGGTTG AGCGGAGACG CACGTCAATT CAGCCTCTAC AACGCCAGCG TTGGCGTGCA TTACAACCTC GATCTGGCTG GCGGCAACCG GCGCGCACTC GAAGCCTTGG CTGCTCGCGC CGACTACCGT CGCTTCGAAC TGAATGCTGC GCGCCTGGCC CTTGCCGGCA ACATGGCAAC CGCTGCCATT ACCCGAGCAC GCCTCGCCGC GCAACTAGAA GCCACTACTG CCATTTTGCG CGTGCAGGAT GAGCAACTGC GCCTAGCCCA TGAACGCGTG CGTATCGGTC AGGCCTCACC TGATGAAGCG TTGAGCCTAC AAGCTCAGGC GGAGCAAACG CGGGCAGAAC TGCCTGCGCT GCGTAAACAA CTGCAACAAA CCGAACATCT ACTGGCGGTG CTAGCCGGTC GTGCCCCAGG CACGGGTGGC ATCCCGGCCT TCACTCTGGC CGATTTCACT CTACCCGTCG AGATGCCGCT CGTCGTGCCC TCAGAACTGG TGCGCCGCCG ACCGGATATC CAGGCGTCAG AGGCGCTGTT GCATGCGGCC AATGCAGACT ATGGTGTGGC TGTCGCCAAG CTCTACCCAC AGATCAACCT GAGCGCCAAC CTTGGTTCTC AGGCGCTGAC CACCGGTGCC CTGTTCGGTG GTGGCTCGGC AGTGTGGGGC CTGGTTGCGC AGCTCACCCA GCCTCTTTTT AATCCAGGGC TACCCGCTGA AAAAAGAGCG GCGCTCGCCG CTTTTGATGC CGCCGTAGCC AATTACCAGA GCGTCGTATT GGAGTCTTTG CGTAACGTCG CCGACACCCT GCGCGCGGTG GAAAGCGATG CACAAACTTT GACTGCCCTC GCTGCCGCTG ATATGGCTGC ACAGGCCTCC TTGCAGTCGG TCGAGCGGCA ATACCGGCTG GGCGCGGCCA GCTACCTGCA ACTGCTCATC GCGCAGCAAC AGGCACAGTC AATCCGGATC AATATGGTTG CGGTCCAGGC ACAACGCCTA GTCGATAGTG TTGCTTTATA TCAGGCCCTG GGAGGTGGTG TCAGTTAA
|
Protein sequence | MEHAKTCQRP ISLERRLAAT YLVAGLVTAG LAGCAAGPDF QRPTAPDVAR YTATPVADRT VSAPTQFGET QRLVEGLPIE TQWWQSLGSS ALDGLINEAF HVSPTLASIS ANLRQAQELL AAQAGSTQYP QVDVALGSQR QQMSPSSQGL SGDARQFSLY NASVGVHYNL DLAGGNRRAL EALAARADYR RFELNAARLA LAGNMATAAI TRARLAAQLE ATTAILRVQD EQLRLAHERV RIGQASPDEA LSLQAQAEQT RAELPALRKQ LQQTEHLLAV LAGRAPGTGG IPAFTLADFT LPVEMPLVVP SELVRRRPDI QASEALLHAA NADYGVAVAK LYPQINLSAN LGSQALTTGA LFGGGSAVWG LVAQLTQPLF NPGLPAEKRA ALAAFDAAVA NYQSVVLESL RNVADTLRAV ESDAQTLTAL AAADMAAQAS LQSVERQYRL GAASYLQLLI AQQQAQSIRI NMVAVQAQRL VDSVALYQAL GGGVS
|
| |