| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1134 |
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| Symbol | |
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| ID | 4655807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 1287122 |
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| End bp | 1289581 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639811099 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_958413 |
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| Protein GI | 120554062 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0216119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATA CTTCCTTGGA TGGTCGAAAA ATCAAAGACA TGCCAGACAT TGCGACGCGT
TTGAAACGTT TTCGTGCGGC CTCTCCTTTA TCATTCCGGC TGGTGGCATG GATCCTTCTG
TTCAGCTCTG CCTTTACATT GCTCGCGTCC GGCATTCAGA TCTATTCAGA CTACCGCGAG
GACCTGTCCA AGATTGAACA GCGGATGCAG GTAATTGAGT CCGGCTACCG CTCCAGCCTT
GCCCAGAGCC TGTGGGCTCT GGATCAAAAA CACCTGCAAA CCCAGATGGA CGGCATTCTG
AGCCTGCCCG ATATCGAACA TCTCCGGCTC CGAATAGAAC CAGACTCCGA ACTGGTCATG
GGCGAACTCC CACGAGACAC CGATACCCTC ACCCACAGTT TCGAGCTGAT CTACCGGGAC
GATGCGGAAT TTCGACTGGG CGAGCTCACC ATCACCGCCA GTCTGCACCG GGTGTATGAC
GAACTAAGGC GCCGGGTGGG CTTCATTCTA GCCACTCAGT TCCTGATCAT ATTTGTTGTG
TCTATTCTGA TTCTGTGGAT ATTCCGTCAT CTGGTCACTC GCCATCTGGC GGACATGGCC
GACTACACCC GGGATCTGTC ATTGCGAAAT CTTTCACGCC CGCTGGAGCT GGATAGGCCA
GATACTCCCG CTTACCAGCG TGATGAACTG GGCATGGTGA CCGAAGCCAT CAACCAGATG
CGCGAACGCC TTATCGATGA CGTCACAAGG CGGGAACGGG ATGAAGCCGA AATCCGGAAA
TTCTCCAAAG CCATCGACCA GAGCCCGTCT TCGGTCCTGA TCTGTGACCG GCAATGGCGC
ATTGAATATG CGAACCGGAA GTTCAGCCAA CTGACGGGGA ACAGCCCGTC TGAGATCATC
GGCAAGCACC CCTCGTCACT TATTGACCCT GGCGTGGATT CCCACGAAGC CAGACAGCTA
TGGAAATCCA TCAGGCTTCA GGTACAGCGC GTGGGCGTTT GGCAAGGCGA AGTCAACAGC
ACACGGAAAA ATGGCGAGCG CTACTGGGAA CAGCTTGTGG TCACCCCTAT CAAGGACAAT
AACGGTGAAA GCACCGGTTA CCTGATACTC GGGGAAGACA TCAGCATCCG CAAACGTTAC
GAGCAACAGC TATTGCGGCA AGCGAATTAC GACATCCTGA CCGGGCTTCC CAACCGCATG
CTTGCGCTGG ACCGCCTGAA ACTGGCGCTG GCCCAGGCAA GGCGTGATGA GTCCAAGGTT
GGGGTAATGT TCCTGGATCT GGACAACTTC AAACACATCA ACGATACCCT CGGCCACGAC
GCCGGTGACA CCCTGCTGAT TGAAGCCGCA CGCCGGATCT CCAGCTGCCT GCGCGGCACC
AGTACCGTTG CGCGGCTGGG TGGTGATGAG TTCCTTGTGG TGCTGCCGGG GCTGAACGGG
CCGGACGCCT CTTCCCAGGT TGCCGAACGT ATTCTGAAAA CCTTCGCACC GCCGTTCATG
CTCAGCGGCC AGGAAGTGTT TGTTACAACC AGTATTGGCA TCGCCACCTT CCCGGACGAC
TCGGATAACA GCGGCACCCT GCTCCAGCAC GCCGATGCGG CCATGTACGA GGCGAAACAC
AAAGGCAAGA GCGCCTATGC CCGTTTTACT CCGGAGATGA GCGAGGTTTC TCACGAGCGT
CTGCAAATGG AATCTCACAT GCGCAAGGCC CTGGAGCTGG GTGAATTCGA GCTCTATTTC
CAACCCATTG TCGACACCGC CAGTGGTGGC CTGGTGGCGG CAGAAGCCCT GCTTCGCTGG
AACAATCCGG CCATGGGCAT GGTGATGCCA GATCGCTTTA TTCCGCTGGC CGAGGAAACC
GGCCTGATCA TTCCGATCGG CGAATGGGTC GTCAAGGAAG CCTGTCAAGC CGCGTACTGC
TGGCAGGCGA TGACCGGGCG CGAGATCAGC ATTGCCGTCA ATGTATCACC ACGCCAGTTC
CGGGACCCCG GGTTTACCGA CGCCATCATG CGCGCGCTGA ACGACAGCAA TTTACGGCCG
GAACTGCTGG AACTGGAAAT CACGGAACGG CTGATTCTGG ACAATTCCAT CGAAACCGCT
GATATCCTCA AACAACTCGA CAAAGTTGGA ATCCGCTTGT CGGTCGACGA TTTCGGAACT
GGTTATTCGG CACTCAGCTA TCTGAAAAGC TATCCGTTCG ATACCCTGAA AATCGACAAG
TCATTTGTTC AGGATGTCCT GAAAGAGAAC GAAGATGCTT CCCTTGTCCG CGCGATCATC
AACATGGCCC ACAGCCTCGG CCTGAAAGTG GTTGCCGAAG GGGTTGAGGA AGAAGACCTG
ACTCACTTCC TGAAAGCAGA GCATTGCGAC TACTCCCAGG GTTACTTCTA TAGTCGCCCC
CTGCCCGAGC AGGACTTCAT TCACTGGCTC GAAACCAATG AGCGGGCCAA TCTAAAGTAA
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| Protein sequence | MSDTSLDGRK IKDMPDIATR LKRFRAASPL SFRLVAWILL FSSAFTLLAS GIQIYSDYRE
DLSKIEQRMQ VIESGYRSSL AQSLWALDQK HLQTQMDGIL SLPDIEHLRL RIEPDSELVM
GELPRDTDTL THSFELIYRD DAEFRLGELT ITASLHRVYD ELRRRVGFIL ATQFLIIFVV
SILILWIFRH LVTRHLADMA DYTRDLSLRN LSRPLELDRP DTPAYQRDEL GMVTEAINQM
RERLIDDVTR RERDEAEIRK FSKAIDQSPS SVLICDRQWR IEYANRKFSQ LTGNSPSEII
GKHPSSLIDP GVDSHEARQL WKSIRLQVQR VGVWQGEVNS TRKNGERYWE QLVVTPIKDN
NGESTGYLIL GEDISIRKRY EQQLLRQANY DILTGLPNRM LALDRLKLAL AQARRDESKV
GVMFLDLDNF KHINDTLGHD AGDTLLIEAA RRISSCLRGT STVARLGGDE FLVVLPGLNG
PDASSQVAER ILKTFAPPFM LSGQEVFVTT SIGIATFPDD SDNSGTLLQH ADAAMYEAKH
KGKSAYARFT PEMSEVSHER LQMESHMRKA LELGEFELYF QPIVDTASGG LVAAEALLRW
NNPAMGMVMP DRFIPLAEET GLIIPIGEWV VKEACQAAYC WQAMTGREIS IAVNVSPRQF
RDPGFTDAIM RALNDSNLRP ELLELEITER LILDNSIETA DILKQLDKVG IRLSVDDFGT
GYSALSYLKS YPFDTLKIDK SFVQDVLKEN EDASLVRAII NMAHSLGLKV VAEGVEEEDL
THFLKAEHCD YSQGYFYSRP LPEQDFIHWL ETNERANLK
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