| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1113 |
|---|
| Symbol | |
|---|
| ID | 4654687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1264328 |
|---|
| End bp | 1265428 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639811078 |
|---|
| Product | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase |
|---|
| Protein accession | YP_958392 |
|---|
| Protein GI | 120554041 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
|---|
| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.250119 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCT CCGATTTTCA TTTTGATCTG CCGGACGAGC TTATCGCCCG TTATCCGCTT
AAAGAACGCA GTGCCTCGCG TCTGCTCAGT CTTGACGGCC TTTCCGGCCA GACCACTCAT
CTGAAGTTTA CTGACCTTCC GGACCTGCTC CAGCCCGGGG ACCTACTGGT ATTCAACAAT
ACCCGTGTTA TTCCGGCCCG ACTGTTTGGC CAGAAGGAAA CCGGTGGCAA AGTGGAAATA
CTGGTTGAGC GTTTACTGGG TGAAAAGGAA TTGCTCGCCC ATACCCGTTC TTCCAAATCT
CCCAAGGAAG GCCAGCGACT ATTGCTGGAA GATGGAGCCG CACTGCGAAT GCTGGCGCGG
AAAGATGCGC TCTTTCATTT CGTCTATGAA GGCGATGAGG CGTTTCTGGA TGTGCTGGAG
CGTATCGGTC ACATGCCTTT GCCGCCTTAT ATGGAGCGGG AAGATGAGCA GTCGGATCGT
GAGCGCTATC AGACCGTATA TGCCAAGGAG GCGGGCGCCG TGGCCGCACC CACTGCCGGG
CTACATTTTG ATGATGTCGT GCTTTCTGCC CTGAAAGCGA AGGGCATTGA GTTTGCATAC
GTTACGTTGC ATGTTGGCGC TGGCACCTTT CAGCCGGTAC GGGTCGACAA GATCGAAGAT
CATGTCATGC ACAGTGAAAT CGCCCATGTG CCGGAAGAGA CGGTAAAGGC CGTTAATGAA
GCCCGCGCTC GGGGTGGCCG GGTCGTTGCC GTGGGTACCA CTTCCGTCCG CTCCCTGGAG
TCGGCCAGCC GGGCAGGGCG TTTGCAGGAG TTCCGGGGCG ACACGGATAT ATTCATCTAC
CCTGGCTACC GTTTCCAGAC CGTGGACGCC ATGATCACTA ATTTCCATTT GCCGGAGTCC
ACACTGATCA TGCTGGTCAG TGCGTTTGCA GGCTATAACA ACATCATGTC TGCGTATCGC
GAGGCGGTGG AGCAAAAGTA CCGGTTTTTC AGTTACGGCG ACGCCATGTT TCTTACCGCT
CAGGAGCCCA GCCGGGGCAT GATGCTGGGA ACGGATTCCG CCGAGCCACA TCAAACCGAA
TCCCGTGGAG AATCACAGTG A
|
|---|
| Protein sequence | MNVSDFHFDL PDELIARYPL KERSASRLLS LDGLSGQTTH LKFTDLPDLL QPGDLLVFNN
TRVIPARLFG QKETGGKVEI LVERLLGEKE LLAHTRSSKS PKEGQRLLLE DGAALRMLAR
KDALFHFVYE GDEAFLDVLE RIGHMPLPPY MEREDEQSDR ERYQTVYAKE AGAVAAPTAG
LHFDDVVLSA LKAKGIEFAY VTLHVGAGTF QPVRVDKIED HVMHSEIAHV PEETVKAVNE
ARARGGRVVA VGTTSVRSLE SASRAGRLQE FRGDTDIFIY PGYRFQTVDA MITNFHLPES
TLIMLVSAFA GYNNIMSAYR EAVEQKYRFF SYGDAMFLTA QEPSRGMMLG TDSAEPHQTE
SRGESQ
|
|---|
| |