| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1106 |
|---|
| Symbol | flgF |
|---|
| ID | 4654679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1256358 |
|---|
| End bp | 1257110 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639811070 |
|---|
| Product | flagellar basal body rod protein FlgF |
|---|
| Protein accession | YP_958385 |
|---|
| Protein GI | 120554034 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4787] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAG CCCTCTATAT TGGAATGTCT GGCGCCAAGC AGAACATGCT GGCCCAGCGT
GCCCATGCCA ACAACCTGGC TAACGTCAAT ACCACCGGGT TCAAGAAGGA TTTTGCCCAG
GCGCGCAGTA TGCCTGTGTT CGGTGAGCAC CATCCCACCC GCGCCTACGC CATGACCGAG
CGGCCCGGCA CTGATCTCTC GCCCGGCGCT TTAATGGAGA CCGGCCGCAA GCTGGATGTG
GCGGTAGACG GCGGTGGCTG GCTCGCCGTT CAAAACAATC TGGGCGAAGA GGTATTCACC
CGTACCGGTA GCTTACAGGT CGACGTGAAC GGGCTTGTGC GGCTGGCGAG TGGTGAGCTG
GTTCTGGGTA ACGGTGGGCC GGTGGCTCTT CCTCCTTTTG ACAATCTTCA GGTTGGCTCG
GACGGCACCA TCTCCATTGT GCCGGTAGGT GGGCCGCCGG ATCAGTTGGT GGAAGTTGAC
CGACTGAAGC TTGTTAACCC ACCGGCAGAT GCACTTGAGA AAGGTCTGGA TGGGTTCATT
CGACGCAAGC CGGATCAGGC TCTGGATGGT CCAGAGCCAC CGGATGCAGC CATGCGTGTC
GCCACTGGTT TTCTCGAAAG TTCAAACGTG AATGCGGTGG AGGAAATGAT CTCCAACCTG
CAGTTGTCTC GCCAATACGA AATGCAGGTG AAGGTAATGA CCACCGCTAA CGAGAATTCC
GAAGCAACGG CACGGCTGTT GCAGAACCTT TAA
|
|---|
| Protein sequence | MDKALYIGMS GAKQNMLAQR AHANNLANVN TTGFKKDFAQ ARSMPVFGEH HPTRAYAMTE
RPGTDLSPGA LMETGRKLDV AVDGGGWLAV QNNLGEEVFT RTGSLQVDVN GLVRLASGEL
VLGNGGPVAL PPFDNLQVGS DGTISIVPVG GPPDQLVEVD RLKLVNPPAD ALEKGLDGFI
RRKPDQALDG PEPPDAAMRV ATGFLESSNV NAVEEMISNL QLSRQYEMQV KVMTTANENS
EATARLLQNL
|
|---|
| |