Gene Maqu_1045 details

Gene Information

• Locus tag: Maqu_1045
• ID: 4653733
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 1196302
• End bp: 1197021
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639811009
• Product: ABC transporter related
• Protein accession: YP_958324
• Protein GI: 120553973
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGATC TCAGTAAAAC CGATAGCAGC CCGATGTTGC GGGTGTCTGA TCTGACCCAT 
CGGGTCAGCC TGGAAACCGA TACGCTCACG ATCTTGCAGG GGGTCAGTCT GGAAATCAAT 
CGGGGAGAGT CCGTAGCCAT TGTCGGTCGG TCTGGTTCCG GTAAAACGAC TTTGCTTGGC 
TTGCTTGCGG GCCTGGATAC ACCCACGGAA GGCACCGTTG AACTGGATGG AGCGGTCATC 
AGCGAGCTGA GTGAAGATGA GCGTGCCAAA CTGCGGGCCC GTCGGGTCGG ATTTGTGTTC 
CAGTCGTTCC AGTTGCTGCC GGCGTTAACC GCGCTTGAAA ATGTCATGCT GCCGCTGGAA 
CTGGGCGGCA CGGAAGCGCC GGAGCAGCGT GCCAGAGAGC TGCTTGAACG GGTCGGCTTG 
GGTGAACGGC TGAACCATAC CCCTCGTCAG TTGTCCGGTG GCGAGCAGCA GCGGGTCGCG 
ATTGCGCGTG CCTTTGCATC CGACCCCGCC ATTCTGTTTG CCGATGAGCC CACGGGCAAT 
CTGGATAACC GGACCGGGCA GGCGGTGTCT GACCTGCTGA TGGATCTGAA CCGGGAGCAG 
GGCACCACAC TGGTGATGGT TACCCATGAT GAACACCTTG CCGAACGTTG CGGCCGGCAG 
CTGCACATCG AGACGGGCAT GCTGACTGAG CCGGATCTGG CCGGGGAGCC GGCACACTGA 

 

Protein sequence

MTDLSKTDSS PMLRVSDLTH RVSLETDTLT ILQGVSLEIN RGESVAIVGR SGSGKTTLLG 
LLAGLDTPTE GTVELDGAVI SELSEDERAK LRARRVGFVF QSFQLLPALT ALENVMLPLE 
LGGTEAPEQR ARELLERVGL GERLNHTPRQ LSGGEQQRVA IARAFASDPA ILFADEPTGN 
LDNRTGQAVS DLLMDLNREQ GTTLVMVTHD EHLAERCGRQ LHIETGMLTE PDLAGEPAH