| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1005 |
|---|
| Symbol | |
|---|
| ID | 4656319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 1146178 |
|---|
| End bp | 1147161 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639810968 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_958285 |
|---|
| Protein GI | 120553934 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCTG AACTTGAGCG GCGCATGCCG ACAACCTCCG ATCCACTCGG CGAGACGCTG
TGTTCACTTC GTATGGACGG TACCGTCTAC GCGACTGCCG AACTGATTAG CCCGTGGGGC
ATGGAGATGC CGCCGCTCGG GGGCAAAATG ATGTTTCACA TCGTCACCCA GGGAAGCTGC
TGGTTGCGTT TCAAAGACCA GGATAGCCTG CTCCTTAAAA CGGGCGACCT GGCGCTGGTA
CCCAAAGGGG AAGGCCACTG TATCTCCCAT AGTAACAATC AGCCGTGCGA GCCCTTTTTT
GATATTCCCG TCACCCGGCT GACAGACCGC TTTGAGTTCA TGCGCTATGG CGGGGCCGGC
ACGGAAGAAC AGCGCACGGG CGAAGAAGAA ACCCGACTGA CCTGCGGCGT GCTTGGCTTC
GACCAGATTG CGGCTCAGAA GCTCATTCGT GAATTGCCAC AGTGCATTCA CATCAAAGGC
GACGATGGCG CCCTGCCCGC CGAGCTTACA ACGCTGATAC AACTGATGGA GCAGGAAGCC
CGCGCACTAT CACCCGGCGG AGTCACAGTG ATGGCCCACC TGGCAGATAT CATCGTGATT
CAGGCCATAC GACACTGGAT CAACTCAAGC GCGGAAGCCA GCAAAGGCTG GCTGGGCGCG
CTGAAAGATC CGAAACTGGG CAAGGCTCTG GCGGCCATAC ACGCACACCC TGAGGCTGAC
TGGACAGTCA GCCGGCTGGC CAGGCACGCG GGCATGTCCC GCTCCGGGTT TTCCGCCCGG
TTTACCGAGG TGATAGGCAC TTCAGTAAAA CAGTACCTGA CCGAATGGAG GATGAACCTG
GCGCGTCTCA GAATTGGTCA ATCACCCGTG ACATTGACTG AGCTGGCTGA AGAGCTGGGG
TACCAATCCG AAGCGGCGTT TTCGAGGGCT TACAAGCGGG TTTTCGGGGT GCCACCACTG
CGGCGGAAAG GCTGCGAAAG GTAA
|
|---|
| Protein sequence | MIPELERRMP TTSDPLGETL CSLRMDGTVY ATAELISPWG MEMPPLGGKM MFHIVTQGSC
WLRFKDQDSL LLKTGDLALV PKGEGHCISH SNNQPCEPFF DIPVTRLTDR FEFMRYGGAG
TEEQRTGEEE TRLTCGVLGF DQIAAQKLIR ELPQCIHIKG DDGALPAELT TLIQLMEQEA
RALSPGGVTV MAHLADIIVI QAIRHWINSS AEASKGWLGA LKDPKLGKAL AAIHAHPEAD
WTVSRLARHA GMSRSGFSAR FTEVIGTSVK QYLTEWRMNL ARLRIGQSPV TLTELAEELG
YQSEAAFSRA YKRVFGVPPL RRKGCER
|
|---|
| |