| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0978 |
|---|
| Symbol | |
|---|
| ID | 4655510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1115873 |
|---|
| End bp | 1116724 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639810944 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_958261 |
|---|
| Protein GI | 120553910 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCT TACGTCAGGC TATGATCCAG ACCATGCGTC AGCATGGTTT TTCCCCGCAG
ACCCAAAAAA GTTATCTCTA TGTAGTCGCG GATCTGGCTC GATATTATCG TCGATCCCCG
GACCAGTTGG AGGTCGGGGA TCTGCAGACC TACTTTAATT ACCTCGTCCA GGAACGTTCC
CTGGCGCCGG CCAGTTGTCG GCTTTACCTG CATGGCATTC GGTTTTTGTA TCTGCAGGTG
CTGCATTGGG CAGACTTCGA CGTGAACCTG GTGCTGCCCA AGCGACCACA GCGCATTCCT
GAGTTACTGA CTCGTCAGGA CGTTGCAAGG ATAGTGGGAG CCACCAAGAA CCCCAAGCAT
CGGGCCTTGC TGTTGATCAC GTATGGCTGC GGCTTGCGAG TGAGTGAAGC CGTGTCATTG
CAAGTGAAGA ACATCGACGG GGAGCGCCAC CTGCTTCACA TCCATCAGGG CAAGGGCGGT
AAGGATCGCA TGGTGCCCCT GACTGACGTG CTACTCGATG TATTGCGAGC GTATTGGTGC
CTTGGCCGCC CCGTACTCTG GCTGTTTCCG AGTGAAGTAC TGGTTGGTCA GCACCTGACC
GCCACCACGG CCCAGAAGGT TTATCGTCAC GCCAAGCGAC TCAGCGGTGT GCAAAGACGC
GGAGGGATAC ACGCACTGCG CCACGCCTAT GCGACCCATC AGCTGGAACA TGGTGTACCG
CTCAACGAGT TACAGAAATA TCTTGGGCAC AGTGATCTGC GCACCACGGA GCGCTACCTG
CACTGGTTGC CGGGAATATC CTCACAAAAC CGTTCGCCTG CGGACTTGAT CGCGGATCTG
GGAGGTGCGT GA
|
|---|
| Protein sequence | MTPLRQAMIQ TMRQHGFSPQ TQKSYLYVVA DLARYYRRSP DQLEVGDLQT YFNYLVQERS
LAPASCRLYL HGIRFLYLQV LHWADFDVNL VLPKRPQRIP ELLTRQDVAR IVGATKNPKH
RALLLITYGC GLRVSEAVSL QVKNIDGERH LLHIHQGKGG KDRMVPLTDV LLDVLRAYWC
LGRPVLWLFP SEVLVGQHLT ATTAQKVYRH AKRLSGVQRR GGIHALRHAY ATHQLEHGVP
LNELQKYLGH SDLRTTERYL HWLPGISSQN RSPADLIADL GGA
|
|---|
| |