| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0965 |
|---|
| Symbol | alaS |
|---|
| ID | 4655494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1098112 |
|---|
| End bp | 1100742 |
|---|
| Gene Length | 2631 bp |
|---|
| Protein Length | 876 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639810928 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_958248 |
|---|
| Protein GI | 120553897 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.171678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG CAGAGTTGCG ACAAGCATTC CTCGAATATT TCCAGCAGCA AGGGCATGCC
ATTGTGCCCA GCAGTTCACT GGTACCCCAC GATGATCCCA CTCTGCTGTT TACCAACGCG
GGGATGAACC AGTTCAAGGA TCTTTTCCTC GGCCGCGAGG AGCGCGACTA TACACGAGCG
ACCAGCTCCC AGAAATGTGT GCGTGCCGGT GGCAAGCACA ATGATCTGGA AAACGTGGGC
TATACCGCGC GCCACCATAC CTTCTTCGAG ATGCTTGGCA ACTTCAGCTT CGGCGATTAC
TTCAAGCGCG AGGCCATTAA TTTTGCCTGG ACTTTCCTGA CTGGCGAACA GCACCTCAAC
CTGCCCCAGG AGAAGCTGTG GGTAACGGTT TACGCCGAAG ACGACGAAGC CTTTGATATC
TGGAACCAGG AAATCGGTGT GCCGGCGGAA CGGATTGTGC GCATCGGCGA CAACAAAGGC
GCCCGCTACG CCTCCGATAA CTTCTGGCAG ATGGGTGATA CCGGACCCTG CGGCCCGTGC
ACCGAGATTT TCTTCGATCA CGGCCCGGAT GTGGCAGGTG GGCCTCCCGG CAGCCCGGAA
GAAGATGGCG ACCGCTACAT CGAAATCTGG AACGTGGTTT TCATGCAGTA CAACCGCACT
GCCGATGGCG AGATGCTGAA CCTGCCCAAG CCCTCGGTGG ACACCGGCAT GGGGCTGGAG
CGGATTGCTG CGGTTCTGCA GGGTGTTCAC AGTAACTACG AAATCGACCT GTTCCAGGAC
CTGTTGAAGG CGGCATCCGA CATCCTGGGT GGTGCGGCCA CCACAGAAGC GTCTCTGCGC
GTGGTGGCGG ACCATATCCG TTCTTGCGCC TTCCTGATTG CCGACGGCGT GATGCCGTCC
AACGAAGGTC GCGGCTTTGT TCTGCGCCGA ATCATTCGTC GCGCAGCTCG CCACGGCAAC
AAGCTCGGTG CTACCCAGCC GTTTTTCTAC AAGCTTACCG GCGCTCTGGT TGAATTGATG
GGCGAGGCTT ATCCGCAGCT GGTGAGTAGT CGCAAGCAGA TCGAAAAGGT GTTGCTGCAG
GAGGAAGAGC AGTTCGCCAA GACCCTGGAC AAAGGCCTGC GCCTGCTGGA GCAGGACATT
GCGGAGCTGA AGGGTACCGA GATTCCCGGT GAAACCGTGT TTACCCTTTA CGATACCTAT
GGGTTCCCGG TCGATCTGAC CAACGATATT GCCCGCGAGC GTGGCCTGAC TCTGGATTAC
GAAGGCTACG AAAAAGCCAT GGAGGCCCAG CGCGACCGGG CTCGTGCCGC CAGCAAGTTT
GGTATCGACT ACAATGCCGC CGGCATCACG ATTGAGGGCA AGACCGAGTT TACCGGTTAT
GACCACGTCG ACGGCCATGA ACGTATCCGC ACGGTGCTGG TCAACGGTGA GGAGCGTAAC
GCGGAAGCGG GTGATGAGTG TGTGGTGGTA TTGGAGCGCA CGCCGTTCTA TGCGGAGTCT
GGTGGTCAGG TGGGTGATAC CGGCCTGCTG ACCTGGAGCG GTGGCCGCTT CCAGGTAACC
GACACCCGCA AAGAAGGGGA TAACCATCTG CATGTGGGCA CCCTGATTGA AGGTGAGCTG
TTCCCCGGGC TGGAAGTGGA TGCGCGGATT GATCATGCCC GTCGTGAGCG CACCAAGCGC
AACCACTCGG CTACGCACCT GCTGCATGCG GCCCTGCGCA ATATTCTGGG TGAACACGTT
ACCCAGAAGG GCTCGCTGGT CGACCCGGAC AAACTGCGAT TCGACTTCTC CCATTTCGAA
GCCGTGACGC CGGAGCAGCT GAGAGAGATC GAGCGTACGG TTAACGAACA GATCCTGGAG
AACACGCCGG TAGATATCGA CATTACCGAT ATGGATACCG CCAAGGAAAA AGGAGCGATG
GCTCTGTTCG GCGAGAAGTA CGGCGATGTA GTACGGGTGC TCACCATGGG TACCGACAAA
TACTCTGTTG AGTTGTGTGG TGGTACTCAC GTTGCCCGTA CCGGCGATAT CGGGTTGTTC
CGCATTACCT CCGAAAGCGG CATTTCCTCT GGTGTTCGTC GTATTGAGGC TGTAACCGGG
TTGGGTGCGC TGGAATGGGT TGATGAAACC GAGCGTACAC TGCGCGAGAC CGCACGTCTG
GTTAAGGGCA CCCGTGATTC TGTCGTCGAC AAGGTCAAGC AGGTTCTGGA CCGCAATCGC
CAGCTTGAGA AGGATGTCGA TGCCCTGAAA GCAAAACTGG CGAGTTCCGC GGGTACTGAT
CTGGCTGGTT CCGCGGTCGA AGTGGCAGGC CTGAAGGTGG TGGCGTCCGA GATGGAAGGC
GCTGACCGCA AGGCCTTGAT GGAAACTGCG GATCAGCTCA AAAACAAGCT GGGCGAGGGC
GTTGTGGTGC TGGCCACTGT TGAAGACGGA AAGGTGGTGC TGGTGGCCGG TGTTACCAAG
TCCGCCACCA ACCGCATCAA GGCTGGCGAC TTGATGAAGC ATCTGGCCTC GCTGGTAGAT
GGCAAAGGCG GCGGTCGCCC CGACATGGCC CAGGGTGGTG GTAATGATCC ATCCCGTCTG
GCCGAAGCCC TCGCTGGTGT ACCGGCCTGG GTTGAGCAAA ATATCGGGTA A
|
|---|
| Protein sequence | MKTAELRQAF LEYFQQQGHA IVPSSSLVPH DDPTLLFTNA GMNQFKDLFL GREERDYTRA
TSSQKCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKREAINFAW TFLTGEQHLN
LPQEKLWVTV YAEDDEAFDI WNQEIGVPAE RIVRIGDNKG ARYASDNFWQ MGDTGPCGPC
TEIFFDHGPD VAGGPPGSPE EDGDRYIEIW NVVFMQYNRT ADGEMLNLPK PSVDTGMGLE
RIAAVLQGVH SNYEIDLFQD LLKAASDILG GAATTEASLR VVADHIRSCA FLIADGVMPS
NEGRGFVLRR IIRRAARHGN KLGATQPFFY KLTGALVELM GEAYPQLVSS RKQIEKVLLQ
EEEQFAKTLD KGLRLLEQDI AELKGTEIPG ETVFTLYDTY GFPVDLTNDI ARERGLTLDY
EGYEKAMEAQ RDRARAASKF GIDYNAAGIT IEGKTEFTGY DHVDGHERIR TVLVNGEERN
AEAGDECVVV LERTPFYAES GGQVGDTGLL TWSGGRFQVT DTRKEGDNHL HVGTLIEGEL
FPGLEVDARI DHARRERTKR NHSATHLLHA ALRNILGEHV TQKGSLVDPD KLRFDFSHFE
AVTPEQLREI ERTVNEQILE NTPVDIDITD MDTAKEKGAM ALFGEKYGDV VRVLTMGTDK
YSVELCGGTH VARTGDIGLF RITSESGISS GVRRIEAVTG LGALEWVDET ERTLRETARL
VKGTRDSVVD KVKQVLDRNR QLEKDVDALK AKLASSAGTD LAGSAVEVAG LKVVASEMEG
ADRKALMETA DQLKNKLGEG VVVLATVEDG KVVLVAGVTK SATNRIKAGD LMKHLASLVD
GKGGGRPDMA QGGGNDPSRL AEALAGVPAW VEQNIG
|
|---|
| |