| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0898 |
|---|
| Symbol | |
|---|
| ID | 4656329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 1024692 |
|---|
| End bp | 1028210 |
|---|
| Gene Length | 3519 bp |
|---|
| Protein Length | 1172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639810861 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_958181 |
|---|
| Protein GI | 120553830 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.149338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGCG CCTGGCTGCT TGTCCTTATA TCGATCACTT ACATTTCACT GCTGTTCCTG
ATCGCCTGGG CAGGTGACCG GCACCCGGGG CTCTACAAGC GTCGCCTGGC CAGAACCCAT
ATTTACGGTT TGTCCCTGGC CGTTTATTTC ACTTCCTGGA CGTTCTATGG TGCGGTTGGT
CGGGCCACTC AGGAAGGGCT GGCATTTCTG CCTATCTACC TGGGCCCTTT ACTGGTATTC
ATTTTCTTTG CGCCACTGCT CCGGCGCATC ATCTACATCA GTAAACGCAA TAACAGTACC
TCCATTGCCG ACTTTATTGC CTCACGCTAC GGCAAATCCC AGGTGCTCGC GGCCATGGTG
GCCATCTTTG CCCTGATCGG CAGCGTTCCC TACATTGCCC TTCAGCTCAA AGCCATTGCC
CTGGGGTTTA ATGTCCTCTC GGGCACCGGT GACAGTTATC AGGAATTGAG TACAGCGGCC
TGGAACGACT CTGCCTGGTA CATCACCCTG GCTCTGGCGG TCTTTACTGT GCTGTTCGGA
ACACGGCACC TGGAGTCCAC AGAACATCAT CGGGGCATGA TCCAGGCCGT TGCCTTTGAA
TCACTGATCA AGCTCATCGC CTTTGTGGCG GTGGGGCTGT TTGTTGGCTA CGGTCTGTAC
GATGGATTCG GGGACCTGTT TACCCGAGTC CGCGAAGCTG ACCTGATGGG CACGCTTACA
ACAGAGTCGC TGGAAGCCCC TGCGTTCCTC ACACAGACGC TGGTTGCCAT GCTGGCCATC
ATCTGTCTGC CACGGCAATT TCACGTGATG GTGGTGGAGA ACACCGATCA CCGGGATTTT
GAGGTCGCTC GCTGGGCGAT GCCGATCTAT CTGATCATCG CCAGCGCATT CGTCATTCCC
ATTGCCGCCG CCGGACTGTT GAGCACTCAC CTGGCAGGCA GCGATCCGGA CATCGTCATC
CTGCAACTGC CGATCATGGC AGGGGAACAC TGGCTTGCCG TACTGGCGTT TCTGGGCGGT
GGATCAGCGG CGGCTGCCAT GGTGATTGTC TGTTCCGTCG CCATAGCCAC CATGGTGAGT
AATGAAATCA TCATGCCAGG CCTGCTCAAG TTCTTCCGAC CAGGCATGAA CCGACGAACC
GATCTCAGCT TCCTGCTGCT GACGATCCGG CGGGTTGCCA TCTTTGTAGT ACTGCTGACC
GCCTACGGCT TCTACCGCAT GGCGGGCGAA GACTACAGCC TGACGGCGTT TGGCTTACTG
TCCTTTGCCG CAGCAGCCCA GTTTGGCCCG GCACTGGTGG GGGGTATTCT GTGGCGTCAG
GGTAACTTTA CCGGCGCCGC CTGGGGCCTG GGGCTTGGCT TCCTGATGTG GTGTTACACC
TTGCTGTTGC CCGCGCTGGT GTCCACAGGC TGGGTTGCCG ATACCCTGAT CGAACACGGC
CTGTTTGGCT GGAACTGGAC CCGACCAACA GCCCTGTTCG GTTCCGAACT GGATCAGATT
AGCCATGGCA TTCTTTGGAG TCTGGGGGTA AACACCGGGG CCTATATTCT GCTCTCCCTG
ATTACCCGGC AACGTATTCG GGAGAAGATT CAGATTGCCG CGTTCTTCCA CGATGCGCAG
CCCAAAGCCG AGAATGCCCA GCACCAGAGC TGGCAGGGTG AGATTCTTAC CTCCGACCTG
CAGGCCCTGA CCGACCGGTT CATGGGGGAA GAACGTTCCG AAAGCATTTT CAGGAACTAC
GAACGACGTA ATGCCATCCG GCTCTATCCT CAGCGGCCAG CTTCCACCCA CCTGATGAAG
TACATAGAGC GCCAGCTGGC ATCGGTGATT GGAGCCTCCA CCGCCCGCGT GGTTCTGGAG
TCGACCCTGA CTGGCCGCGA TATGCAGATT GAGGACGTGG TCAGCATTGT CGATGAAGCC
TCCCAGGCCA TGACCTTCAG CCGGGAATTA CTGCAGTCTG CCATCGAGAA CATCAGCCTG
GGCGTGTCCG TGGTCAACCA TCAGCAGCAA CTTGTCGTCT GGAACCATCG TTATCTTGAA
CTGTTCAACT ATCCCAAGGG GTTTGTGCGG GTTGGCCGGC CGGTTGAAGA CCTGATGCGC
TACAACCTCA CCAACGCCAA CCTGTCTGCC CGGCGAATTG ACGACATCGT CGAGAACCGC
TGTAACAGCA TGCGCGAAGG CAAACCCATG TCTTACGAGC GTCAGCGGCC CGATGGCACG
GTGGTCCGGG TGGATGGCAG TCCGATTCCA GGCGGCGGCT ATGTCACCAC GTTCCAGGAC
ATTACCGCCA TGCGCAGGAC CGAGCAGGCC CTGAAGGAAA CCAACATCTA TCTGGAACAA
AGGGTCCGCG AGCGCACCCA GGAACTGCAG GTGATCAATG AGCAGATGCT CAAAGCCAAG
TCGGTAGCCG AGCAGGCGAA CCAGAGTAAA ACCCGCTTCC TTGCCTCTGC AAGCCACGAC
CTGCTGCAAC CCCTGAACGC AGCAAGACTC TTTACCTCCG CGTTGTCCGG CAAAGTGAAC
GAGGGCGAAA CCCGGGATCT GGTAGACCAC ATCGACAGCT CGCTGGGCGC GGCTGAGGAG
ATCATCAGTA CACTGCTGGA CATTTCAAAG CTTGATGCCG GGGCACTTGA GCCGGATATC
GGCGTGTTTC CGGTCAACGA GCTGCTTCGG CATCTGGCCA CCGAATTTTC AGCCATCGCC
AAGGATCAGG GGCTGGAACT GCATGTGGTC CCCAGTACCG CCTGGGTCCG TTCCGATGCG
AAACTTCTGC GCCGGGTGGT ACAGAACTTC CTTTCCAATG CCATCCGCTA CACCGCAAGC
GGCAAGATTC TGATGGGCTG CCGACGCCTG AAAGGCTATC TGCGCATTGA AGTCTGGGAC
ACCGGACCGG GTATGTCAGA TGACCAGCTT AATCACATCT TTGAGGAGTT TCGCCGATTC
CAGCATGGTC GCGACAAGAA GGGGCTGGGG CTTGGCCTGG CCATTGTTGA TCGTATCAGC
GGCATGCTTA ACCACCCGGT AACCGTACAT TCCATCCAGG GCAAAGGCAG CGTATTCGGG
ATTACGGTTC CGGTCGCCCC GGCCGATCAA AGCCGACTGG ATGCCCAGAA GAGTGGCAGC
AGTTCAAGAA GGGTCTCCAA TCTTGGTGGC CTGCATGTGC TTTGCATCGA CAATGATGCA
GCGATTCTTC AGGGCATGGT AGCACTGCTG GGTAACTGGC AGTGTGATGT CACTGCCGCT
GAAAGCCTGG ACGATGCTCT GACCAAACTG GACGGGCGCC AGCCCGATAT TATACTTGCT
GATTATCAGC TGGATGATAA CCGCAATGGA CTGGATGCCA TGGACAGCAT CAGGGAACAT
CTGGGTAACG ATATTCCCGG CATCCTGATT ACCGGCTATA TGGCGCCGGA GGTACGTGAC
GACGCAGGCA ACCGGGGTTA TCAGGTACTT TACAAACCAG TAAAGCCTGC AGCCCTGCGA
GCACTCGTAA ACAAACTACT TAAACAGAAG CGGTCATGA
|
|---|
| Protein sequence | MISAWLLVLI SITYISLLFL IAWAGDRHPG LYKRRLARTH IYGLSLAVYF TSWTFYGAVG
RATQEGLAFL PIYLGPLLVF IFFAPLLRRI IYISKRNNST SIADFIASRY GKSQVLAAMV
AIFALIGSVP YIALQLKAIA LGFNVLSGTG DSYQELSTAA WNDSAWYITL ALAVFTVLFG
TRHLESTEHH RGMIQAVAFE SLIKLIAFVA VGLFVGYGLY DGFGDLFTRV READLMGTLT
TESLEAPAFL TQTLVAMLAI ICLPRQFHVM VVENTDHRDF EVARWAMPIY LIIASAFVIP
IAAAGLLSTH LAGSDPDIVI LQLPIMAGEH WLAVLAFLGG GSAAAAMVIV CSVAIATMVS
NEIIMPGLLK FFRPGMNRRT DLSFLLLTIR RVAIFVVLLT AYGFYRMAGE DYSLTAFGLL
SFAAAAQFGP ALVGGILWRQ GNFTGAAWGL GLGFLMWCYT LLLPALVSTG WVADTLIEHG
LFGWNWTRPT ALFGSELDQI SHGILWSLGV NTGAYILLSL ITRQRIREKI QIAAFFHDAQ
PKAENAQHQS WQGEILTSDL QALTDRFMGE ERSESIFRNY ERRNAIRLYP QRPASTHLMK
YIERQLASVI GASTARVVLE STLTGRDMQI EDVVSIVDEA SQAMTFSREL LQSAIENISL
GVSVVNHQQQ LVVWNHRYLE LFNYPKGFVR VGRPVEDLMR YNLTNANLSA RRIDDIVENR
CNSMREGKPM SYERQRPDGT VVRVDGSPIP GGGYVTTFQD ITAMRRTEQA LKETNIYLEQ
RVRERTQELQ VINEQMLKAK SVAEQANQSK TRFLASASHD LLQPLNAARL FTSALSGKVN
EGETRDLVDH IDSSLGAAEE IISTLLDISK LDAGALEPDI GVFPVNELLR HLATEFSAIA
KDQGLELHVV PSTAWVRSDA KLLRRVVQNF LSNAIRYTAS GKILMGCRRL KGYLRIEVWD
TGPGMSDDQL NHIFEEFRRF QHGRDKKGLG LGLAIVDRIS GMLNHPVTVH SIQGKGSVFG
ITVPVAPADQ SRLDAQKSGS SSRRVSNLGG LHVLCIDNDA AILQGMVALL GNWQCDVTAA
ESLDDALTKL DGRQPDIILA DYQLDDNRNG LDAMDSIREH LGNDIPGILI TGYMAPEVRD
DAGNRGYQVL YKPVKPAALR ALVNKLLKQK RS
|
|---|
| |