| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0871 |
|---|
| Symbol | |
|---|
| ID | 4655105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 988222 |
|---|
| End bp | 991392 |
|---|
| Gene Length | 3171 bp |
|---|
| Protein Length | 1056 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639810829 |
|---|
| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like |
|---|
| Protein accession | YP_958154 |
|---|
| Protein GI | 120553803 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGTC TGGGTTCAAG AGTGGGCACT TTGTGTGCCT CGTTAGTTTT GTGTGTCTCT
TCTTCCATTT CCTGGGCTGA CGATACCGAA ATATTCTTTA ATACTGAGTC TGAAACCAGT
ATCAGGCCAA ACCTTCTGTT CATACTCGAT AACTCCGGTA GTATGGCAAC TGCTATGGAT
GTTGTAGTCG TTAAAGAACC GTATGACCCT TCTACTAGCT ACTCAGGTAG AGCTGATAAA
GATAGGGTCT ATTACAAGGA TGATGGAGAT TGGTATTACA TAAACAAATC TACAATACAG
TGTTCAGATC TGATCGATAG GATCGATGCA GTTGGCGAAT TAAAAAGCTA CAGGATGGCG
TATAAGAGGG GGAGAAGCTG GAGGAGCTTC AATGAAAATA ACAATGCTTC ACGGGATGTG
GACTGCGAGG CTGATAACGA TGTTTCTGGT GTAAACTGGT CAAACATAAC GGCCCACACT
TATGTTTCGG GTAACTATCG GAATTGGTTG AGTTCGTCGA CTGAAACGGT AAGAAAAACC
AGAATGGAAA TTATGCAGGA TGTGGCGAAG CGTCTTGCGG ATACAGTGAC GGGCGTTAAC
ATTGGTTTGA TGGCGTTTAA CCAGAGCCAG AATGGTGAGG GCGGCCGAGT ATTGAACAAC
GTTAGTAACG TCAAAGACAA TGCATCTGCC TTCAAAGCCA AAGTTGATGG TCTATACCCT
AGTGGCCAAA CACCCTTATC GGAAACACTT TTTGGCGCCA TGCGTTACTT CCAGGGCGGA
AAGCCGTTCC TTGATAGAAA CCCTGTTTCT GGAACGGTTG ATGGCAGTAA TAACTACAAA
TCTCCAATCG AATTGGAGTG TCAAGCGAAT AACGTAATTC TGCTTACAGA TGGCGCGCCA
ACCAGCGATA CCAACCATAA TAGCTTTATA GGTTCAGCGA TTGGCAAAAC CTGTTCTGGT
AATTGCCTTG ATGAAATTGC CGGTTATATG GCTACTAATG ACATGTCTGC GGCGTTTTCG
GGGGATCAAA CTATAAAAAC CTATACGGTA GGTTTTTCTA TTGACGATCC TTTGCTCGGG
GCTGCAGCGA CAGCGGGAGG TGGGGAATAT TATGTCGCAA ACAATGCCCA GCAATTGGCA
GACGCCTTTG ATGACATTCT TCGAAGCGTT ATGGATACCA GCAGTACATT TGTTGCTCCG
GGTGTCGCGG TCAACTCGTT CAACCGTCTG AGTCACTTCG ATGCGCTGTA CTACTCTGTT
TTCGAACCGG ACACCCGGCC TTTGTGGCAA GGTAACCTGA AGCGCTACAA AATCTCCGCG
GGCGGTAAGA TCGTCGATGT CAACGGCAAA GTAGCAATTG ATTCCGCCAC GGGGTTCTTT
AAGGATGACA CGCAAAGCTG GTGGTCGGCA TCTGCCGATG GTAAAGAGGT GAAGGCAGGC
GGCGCACGTA GCCAGCTGCC CAATGTGCCG AGCAATCGCA AAGTGTACAC ATGGCTCAAA
GGCAAGGCCC TGAGCGGCAG TGATAACCTG GTATCTACGT CGAACAAGGC CAACCTGACG
AAAAGTGTGC TGGGAGACTC CAGCATGAGC GACACCGAGC ACACCAATCT GATTCGCTGG
ATTCGGGGAG AAGATGTTAA AGACGAAAAT GAAAACGGGT CCACGAGCGA TGCCAGAAAG
TTTATTGCCG ATCCTTTGCA CTCTGAACCG AAACTGATTG TTTATGGCGG TACCGAGGCT
TCTCCGGACA CTACGATTTA TTTCGGTGAC AACCAGGGCT ATTTGCATGC CATTGATGGT
GAAACAGGCG AGTCCTACTT TGCCTTTATG CCGGAGGAAA TGCTGAACAA GCAGAAAACC
TTGATGGAGA ACAAAGAAAC GGAGTCTGGT CGCATCTATG GAATGGACGG TTCTGTCGTC
AGCTGGGTTA AAAATCCCAG CGGCGGAATC AAGGCGGCGG ATGGTGATCA TGTGTACCTT
TACACAGGTA TGCGTCGCGG CGGGCGTAGC TACTATGCTT TGGATGCAAC CGACAGGGAT
GCTCCAAAGG CGTTGTGGAA AATCAATGGT GGATCCGGTG ATTTTTCAGA GCTCGGCCAA
ACCTGGTCTA CGCCGGTCAA AACCAAGCTG AATATCGGCG GTACCGAGAC AGATGTCCTG
TTTTTCGCCG GTGGCTATGA TGAAGACCAG GACGATGTGG CGACGATTAC CGAAGATGAC
ATGGGCCGGG CGTTGTATGT GGTTGATGCG AAAACGGGCA GCCGCTTGTG GTGGGCTGGT
CCAAAAGGCT CCGGTGCGAA TCTCGAACTT TCTCAGATGA AGTACAGCAT GCCTGCATCG
CCGAAGGTTC TGGATATCGA TGGTGATGGG TTGGCAGATC AGGCTTATAT CGGTGATATG
GGTGGTCAGA TCTGGCGCTT CGATTTCAAC AATGGTAACT CTGCCGGTAC ACTCGGATTT
GGTGGTCGCA TCGCCAACCT TTCCGGAGGC GACCATGCGT CGGCGCGGCG CTTCTATCAT
ACACCGGACC TTTCCGTGAG CACCTTCTGG GGGAAACGCT ACCTTAACCT GGTTATTGGT
TCTGGTTTTC ACGCCCATCC CCTGAACAAG GTTATCGAGG ATCGCGCCTA TATGATTCGC
ATTCCGGAGC TGTTTAGTGC GCCTGTCGAT GCTTCGACTG GATACGTAAC CTACACCACG
CTCACAGAAA GTGACCTTCT TGATATCACG GATAACAAGA TTGGAGAGGG TACGGATAGC
GAAAAACTGG CTGCCGAGAA AGCCTTGCAG AGCGCAAATG GCTGGATGCT CAAGCTTGAG
AATAAAGGTG AAAAGGTATT GTCCCAGAGC CTGGTGGTGG ATGGTGTGGT TACCTTCACA
ACCTATCAGC CAGCGCCGGC ACTTTCTGCA TGTGCGCCGT CGACAGGTCG CTCACGACTC
TACTCAATCG CGTTGCGTGA TGGTCAGCCT GTTCGCAATT ATGACGGCAT TGGTGATCCG
GATGAGCTGA CCAAGCCAGA TCGGGTGAAA GATATTCCGG TTCCAGGGAT TCCACCTGCA
CCGAAACTTC TCAGAACGGA AAAAGACGGT TTAATTTGTG TTGGTACAAA CTGTGAGAAG
GTTGAAGATA GCAACACCTT TACTCAAACG TTCTGGAGGG AAGTGGAGTG A
|
|---|
| Protein sequence | MTRLGSRVGT LCASLVLCVS SSISWADDTE IFFNTESETS IRPNLLFILD NSGSMATAMD
VVVVKEPYDP STSYSGRADK DRVYYKDDGD WYYINKSTIQ CSDLIDRIDA VGELKSYRMA
YKRGRSWRSF NENNNASRDV DCEADNDVSG VNWSNITAHT YVSGNYRNWL SSSTETVRKT
RMEIMQDVAK RLADTVTGVN IGLMAFNQSQ NGEGGRVLNN VSNVKDNASA FKAKVDGLYP
SGQTPLSETL FGAMRYFQGG KPFLDRNPVS GTVDGSNNYK SPIELECQAN NVILLTDGAP
TSDTNHNSFI GSAIGKTCSG NCLDEIAGYM ATNDMSAAFS GDQTIKTYTV GFSIDDPLLG
AAATAGGGEY YVANNAQQLA DAFDDILRSV MDTSSTFVAP GVAVNSFNRL SHFDALYYSV
FEPDTRPLWQ GNLKRYKISA GGKIVDVNGK VAIDSATGFF KDDTQSWWSA SADGKEVKAG
GARSQLPNVP SNRKVYTWLK GKALSGSDNL VSTSNKANLT KSVLGDSSMS DTEHTNLIRW
IRGEDVKDEN ENGSTSDARK FIADPLHSEP KLIVYGGTEA SPDTTIYFGD NQGYLHAIDG
ETGESYFAFM PEEMLNKQKT LMENKETESG RIYGMDGSVV SWVKNPSGGI KAADGDHVYL
YTGMRRGGRS YYALDATDRD APKALWKING GSGDFSELGQ TWSTPVKTKL NIGGTETDVL
FFAGGYDEDQ DDVATITEDD MGRALYVVDA KTGSRLWWAG PKGSGANLEL SQMKYSMPAS
PKVLDIDGDG LADQAYIGDM GGQIWRFDFN NGNSAGTLGF GGRIANLSGG DHASARRFYH
TPDLSVSTFW GKRYLNLVIG SGFHAHPLNK VIEDRAYMIR IPELFSAPVD ASTGYVTYTT
LTESDLLDIT DNKIGEGTDS EKLAAEKALQ SANGWMLKLE NKGEKVLSQS LVVDGVVTFT
TYQPAPALSA CAPSTGRSRL YSIALRDGQP VRNYDGIGDP DELTKPDRVK DIPVPGIPPA
PKLLRTEKDG LICVGTNCEK VEDSNTFTQT FWREVE
|
|---|
| |