| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0725 |
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| Symbol | rpsC |
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| ID | 4654423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 833982 |
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| End bp | 834665 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639810684 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_958009 |
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| Protein GI | 120553658 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000305587 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTCATA AAGTAAATCC AACCGGCATT CGCCTGGGTG TGATCAAAGA GCACAACTCA
GTGTGGTACG CCGACAAAAA GGACTACGCG AAGAATCTTC TGAATGATAT TCAGGTTCGC
GAATTCCTGG ACAAGCGCCT GGTTAAGGCG TCTGTCAGCA AGATCGTGAT CGAGCGCCCT
GCTCAGAACG CCCGGATCAC GATCCATACC GCCCGCCCCG GTATTGTTAT CGGTAAGAAG
GGTGAAGATG TTGACCGTCT GCGTCGCGAA GTCAGCGACA TGATGGGTGT GCCTGTGCAC
ATCAACATCG AAGAAGTCCG CAAGCCGGAC CTGGATGCCC GCCTGGTAGC GCAAAACGTT
GCCGGCCAGC TGGAGCGTCG TGTGATGTTC CGTCGCGCTA TGAAGCGTGC GGTTCAAAAC
GCCATGCGTC AGGGAGCCAA GGGTATCAAG ATTCAGGTTG GCGGTCGTCT TGGGGGTGCT
GAAATCGCAC GTTCCGAGTG GTATCGCGAA GGTCGTGTAC CTCTGCACAC ACTGCGTGCA
GATATTGATT ATGCAACCTA TGAAGCGCAC ACCACTTACG GCGTTATCGG CGTAAAGGTA
TGGATCTTCA AAGGTGAGAT TCTTGGTGGT ATGGAGCAGG TCCGTGCTGA CAAGAAAGCC
TCTGGGAAGA AAGGTTCTAA GTAA
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| Protein sequence | MGHKVNPTGI RLGVIKEHNS VWYADKKDYA KNLLNDIQVR EFLDKRLVKA SVSKIVIERP
AQNARITIHT ARPGIVIGKK GEDVDRLRRE VSDMMGVPVH INIEEVRKPD LDARLVAQNV
AGQLERRVMF RRAMKRAVQN AMRQGAKGIK IQVGGRLGGA EIARSEWYRE GRVPLHTLRA
DIDYATYEAH TTYGVIGVKV WIFKGEILGG MEQVRADKKA SGKKGSK
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