Gene Maqu_0720 details

Gene Information

• Locus tag: Maqu_0720
• Symbol: rplD
• ID: 4654418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 831582
• End bp: 832187
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639810679
• Product: 50S ribosomal protein L4
• Protein accession: YP_958004
• Protein GI: 120553653
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000427281
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTGA CAATTACTGG TAGCGGCAAG GGGATTTCTG TTTCCGACGC TGCGTTTGCC 
AAAGATTTTA ACGAAGCTCT GGTGCATCAG GTGGTTACTG CTTACATGGC AGCTGGCCGT 
CAGGGTACCA AGGCCCAGAA GACACGTTCC GAAGTCAGTG GTGGTGGCAA GAAGCCATGG 
CGTCAGAAGG GTACTGGTCG TGCCCGTGCT GGTACCATTC GTAGCCCGAT CTGGCGTTCA 
GGCGGCGTAA CCTTTGCTGC CAAGCCCCGT GACTTCGAGC AAAAGGTTAA CCGCAAGATG 
TACCGTGCGG CGATGCGTTC CATTTTCTCC GAGCTGGTAC GCCAGGAGCG TCTGGTTGTG 
GTTGACGACA TGAATGTCGA TACGCCCAAG ACCAAGGCCT TCACTGCCAA GCTGAGCGAT 
CTGGGTGTGT CCAACGCTCT GATCCTGTCT GAGAATGTTG AGCAGAATCT GCACCTGGCT 
TCCCGCAACG TTCCTCATGT GGACGTTCGC GATGTGGCAG GTCTGGATCC GGTCAGCCTG 
GTTGCCTTCG AGAAAGTCGT GGTGACTGTT CCCGCTCTGA AGAAGATCGA GGAGATGCTG 
GGATGA 

 

Protein sequence

MELTITGSGK GISVSDAAFA KDFNEALVHQ VVTAYMAAGR QGTKAQKTRS EVSGGGKKPW 
RQKGTGRARA GTIRSPIWRS GGVTFAAKPR DFEQKVNRKM YRAAMRSIFS ELVRQERLVV 
VDDMNVDTPK TKAFTAKLSD LGVSNALILS ENVEQNLHLA SRNVPHVDVR DVAGLDPVSL 
VAFEKVVVTV PALKKIEEML G