| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0712 |
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| Symbol | rpoB |
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| ID | 4654410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 817511 |
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| End bp | 821587 |
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| Gene Length | 4077 bp |
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| Protein Length | 1358 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639810671 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_957996 |
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| Protein GI | 120553645 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.982891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTACT CCTACACTGA GAAAAAGCGG ATTCGCAAAG ACTTTAGTAA ATTGCCTTCC
GTGATGGAAG TCCCCTATTT GCTGTCAATT CAGCTGGATT CGTTCCGGGA CTACCTCCAA
ATGGAAACTG CGCCTGAAGA CCGCCGGGAA ACTGGTCTTC ATGCAGCATT CAAATCCGTA
TTCCCGATCG TCAGTTATTC TGGCAACGCC GCGCTCGAGT ATGTGAGCTA CCGAATCGGC
GAGCCAGTCT TTGACGTCAA GGAATGTCAG CTCAGGGGCG TAACTTACGC CGCGCCGCTA
CGGGTGAAGG TCCGCCTGAT CATTTATGAT AAGGAATCGT CTAACAAGGC GATCAAGGAC
ATCAAAGAGC AAGAAGTCTA CATGGGCGAA ATGCCCCTGA TGACCGAGAA CGGTACCTTT
GTTGTTAACG GTACCGAGCG CGTTATTGTT TCCCAGCTCC ACCGTTCACC TGGTGTGTTC
TTCGATCACG ACAAGGGTAA GACCCATTCC TCCGGCAAGC TGTTGTACTC AGCCCGGGTG
ATTCCTTACC GTGGCTCCTG GCTGGACTTC GAGTTCGATC CGAAGGACGC CGTCTTCGTT
CGTATCGACC GCCGTCGTAA GCTGCCGGCT TCCATTCTGT TGCGTGGCCT GGGCTACACC
TCCGAGCAAA TGCTCGAGAT GTTCTTCGAA ACCAGTAAGT TCAGCCTGGG CGCGGAAGTG
TGCAAGCTGG AGCTGGTACC AAGCCGTCTG CGTGGCGATA TCGCAACCTT CGACATCAAA
GACAATGACG GCAACGTGAT TGTTGAAGAA GGCCGCCGGA TCACTGCCCG TCACATCAAG
CAGCTGGAAA AAGCCGGTAT CACCGAGCTG GAAGTACCGA CCGAGTATCT CTACGGTCGT
GTCCTGGCCA AGGACATGAT CGATCAGTCT ACCGGCGAAG TGCTGGTGGA ATGCAACACC
GAACTGACCG AGGAAGTGGT TACCAAGATC CTCGATGCCG GTGTTAAAGA CATCGAAACC
CTGTACACCA ACGACCTGGA TTGCGGTCCG TTCATGTCGG ATACCCTGCG TATCGACCCG
ACCCGCACCC CGCTCGAAGC GTTGGTGGAA ATCTACCGCA TGATGCGCCC GGGCGAACCG
CCTACCAAGG AATCTGCGGA GAATCTGTTT AACAACCTGT TCTTCTCCGA AGAGCGTTAC
GATCTGTCCG CCGTTGGCCG GATGAAACTG AATCGTCGCC TGGGCCGGGA AGAAAGCACC
GGCGAAGGTA CGCTGACGCA CGACGATATC ATCGACGTAC TGAAGACCTT GATTGCCATC
CGTAACGGCC AGGGCCAGGT GGACGACATT GATAACCTGG GCAACCGTCG TGTGCGTTGC
GTGGGTGAAA TGGCCGAAAA CCAGTTCCGT GTTGGTCTGG TGCGTGTTGA GCGTGCAGTG
CGTGAGCGTC TGAGTCTCGC CGAAAGCGAA GGCCTGATGC CGCAGGACCT GATCAACGCC
AAGCCGGTTG CGGCCGCTGT GAAAGAGTTC TTTGGCTCCA GCCAGCTGTC CCAGTTCATG
GATCAGAACA ACCCGCTGTC CGAGGTTACC CACAAGCGTC GTATTTCCGC GTTGGGCCCA
GGTGGTCTGA CCCGTGAACG CGCCGGCTTC GAAGTCCGTG ACGTACATCC GACCCACTAC
GGCCGTGTGT GCCCGATCGA GACTCCGGAA GGCCCGAACA TCGGTCTGAT CAACTCGCTG
GCAACCTACG CCCGGTCCAA CTCCTACGGC TTCCTTGAGA GTCCGTACCG GAAGGTGGTC
GATGGTGTGG TGACCGACGA GGTGGTTTAC CTCTCTGCGA TTGAAGAGAG CAACTACGTG
ATCGCCCAGG CCAGCGCTGC TACCGATGAA GGCAAGCGTC TGACTGATGA GCTGGTTACG
GTGCGTCACC AGAACGAATT TACCGTAGCG CCTCCGGAAG CGGTTAACTT CATGGACGTA
TCTCCGCGCC AGGTTGTGTC GGTCGCGGCG TCTCTGATCC CGTTCCTGGA GCACGACGAT
GCCAACCGGG CCCTGATGGG TGCGAACATG CAGCGCCAGG CGGTCCCGAC CCTGAAGTCG
CAGGTGCCGC TAGTGGGTAC CGGTGTTGAG CGCACGGTGG CTCAGGACTC TGGCGTGTGT
GTAACCGCGC GTCGCGGTGG CGTGATCGAA AGCGTGGATG CGGCCCGTAT CGTGGTTCGC
GTCAACAACG AAGAAACCGA AGCCGGTGAT GCAGGTGTGG ATATCTATAA CCTCACCAAG
TACACCCGCT CCAACCAGAA CACCTGTATC AACCAGCGTT CTATCGTGCG TCAGGGTGAC
GTGATTGCCC GTGGCGATGT GTTGGCGGAT GGTCCTTCTG TGGATCTGGG TGAGCTGGCT
CTGGGTCAGA ACATGCGCAT CGCGTTCATG CCCTGGAACG GTTACAACTT TGAGGACTCC
ATTCTCATCT CCGAGAAAGT GGTTCAGGAA GACCGTCTGA CCACCATCCA CATTCAGGAA
CTGACCTGTG TGGCTCGTGA TACCAAGCTG GGCAGCGAAG AAATCACCGC AGATATTCCG
AACGTGGGTG AAAGCGCACT GTCCAAGCTG GATGAGTCTG GCATTGTCTA CATCGGCGCT
GAAGTGGGCC CCGGCGACAT TCTGGTTGGT AAGGTAACGC CGAAAGGCGA AACCCAGCTG
ACCCCGGAAG AGAAGCTTCT GCGTGCCATC TTTGGTGAAA AAGCGTCTGA CGTTAAGGAC
ACATCTCAGC GTGTGCCGAC CGGTACCCGT GGTACGGTCA TTGACGTTCA GGTCTTCACC
CGTGACGGTA TCGAGAAAGA TGCCCGAGCG CTTTCGATCG AGAAAGAGCA GCTGGACAAG
TACCGTAAGG ACCTGAAAGA CGAGTACCGC ATTGTTGAAG GTGCGACGTT CGAGCGTCTG
ATGGCCGCTC TGAAAGGTCA GGAAGTGATC AGTGGTCCGG GCCTGAAAAA GGGTGCGAAG
CTGGAAGAAG CCTACCTGGC GGAACTGCCG CGAGCCGACT GGTTCAAGCT GCGCATGAAA
GACGAAGCTT TGAACGAGTT GCTGGAGAAA TCCGAGCAGG GCCTCGAGGA TCGCAAGAAA
GAGCACGAAG CTCGCTTTGA CGACAAGAAG GGCAAGCTTC AGCAGGGCGA CGATCTGGCT
CCTGGCGTAC TCAAGATTGT TAAGGTTTAC CTGGCAATCA AGCGTCGTAT TCAGCCGGGC
GACAAGATGG CTGGCCGTCA TGGTAACAAG GGTGTTATCT CTGCGGTTAT GCCGATTGAA
GACATGCCCT ACGACGAGTT TGGCAATACC GTCGATATCG TTCTGAACCC GCTCGGTGTA
CCGTCGCGGA TGAACGTTGG TCAGGTGCTT GAAACTCATC TGGGTGCTGC GGCTAAAGGC
CTGGGTGAGC GGATCAGCCG CATGCTTGAT GAGCAGCGCA AGGTGGCTGA GCTTCGCAAG
TTGCTGGACG AGATCTACAA TCATTCGGAC GAAGTGTTCA AGGTTGACCT TGACAGTCTG
ACTGACAAAG AGATTTTCGA GCTGTGCAAC AACCTGCGTG GTGGCGTTCC CATGGCAACA
CCGGTCTTCG ATGGTGCCAA GGAAGCCGAG GTGAAGAGAA TGCTTGAGTT GGCTGGCCTG
GATACTACCG GTCAGACCAA GCTCTATGAC GGCCGTACCG GCGATGCGTT TGATCGTCCG
GTAACTGTTG GCTATATGTA CATTCTCAAG CTGAACCACC TGATCGACGA CAAGATGCAC
GCTCGTTCTA CCGGCTCTTA CAGCCTGGTT ACCCAGCAGC CGCTGGGTGG TAAGGCTCAG
TTCGGTGGTC AGCGCTTCGG TGAGATGGAA GTCTGGGCTC TGGAGGCATA CGGTGCCGCC
TATACCCTGC AGGAAATGCT CACCGTCAAG TCTGACGACG TAAACGGTCG GACCAAGATG
TACAAGAACA TTGTCGATGG CGATCATCGT ATGGAGCCGG GCATGCCTGA ATCCTTCAAC
GTTCTTGTCA AGGAAATCCG CTCGTTGGGT ATCGACATCG AGCTGGAATC CGAGTGA
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| Protein sequence | MTYSYTEKKR IRKDFSKLPS VMEVPYLLSI QLDSFRDYLQ METAPEDRRE TGLHAAFKSV
FPIVSYSGNA ALEYVSYRIG EPVFDVKECQ LRGVTYAAPL RVKVRLIIYD KESSNKAIKD
IKEQEVYMGE MPLMTENGTF VVNGTERVIV SQLHRSPGVF FDHDKGKTHS SGKLLYSARV
IPYRGSWLDF EFDPKDAVFV RIDRRRKLPA SILLRGLGYT SEQMLEMFFE TSKFSLGAEV
CKLELVPSRL RGDIATFDIK DNDGNVIVEE GRRITARHIK QLEKAGITEL EVPTEYLYGR
VLAKDMIDQS TGEVLVECNT ELTEEVVTKI LDAGVKDIET LYTNDLDCGP FMSDTLRIDP
TRTPLEALVE IYRMMRPGEP PTKESAENLF NNLFFSEERY DLSAVGRMKL NRRLGREEST
GEGTLTHDDI IDVLKTLIAI RNGQGQVDDI DNLGNRRVRC VGEMAENQFR VGLVRVERAV
RERLSLAESE GLMPQDLINA KPVAAAVKEF FGSSQLSQFM DQNNPLSEVT HKRRISALGP
GGLTRERAGF EVRDVHPTHY GRVCPIETPE GPNIGLINSL ATYARSNSYG FLESPYRKVV
DGVVTDEVVY LSAIEESNYV IAQASAATDE GKRLTDELVT VRHQNEFTVA PPEAVNFMDV
SPRQVVSVAA SLIPFLEHDD ANRALMGANM QRQAVPTLKS QVPLVGTGVE RTVAQDSGVC
VTARRGGVIE SVDAARIVVR VNNEETEAGD AGVDIYNLTK YTRSNQNTCI NQRSIVRQGD
VIARGDVLAD GPSVDLGELA LGQNMRIAFM PWNGYNFEDS ILISEKVVQE DRLTTIHIQE
LTCVARDTKL GSEEITADIP NVGESALSKL DESGIVYIGA EVGPGDILVG KVTPKGETQL
TPEEKLLRAI FGEKASDVKD TSQRVPTGTR GTVIDVQVFT RDGIEKDARA LSIEKEQLDK
YRKDLKDEYR IVEGATFERL MAALKGQEVI SGPGLKKGAK LEEAYLAELP RADWFKLRMK
DEALNELLEK SEQGLEDRKK EHEARFDDKK GKLQQGDDLA PGVLKIVKVY LAIKRRIQPG
DKMAGRHGNK GVISAVMPIE DMPYDEFGNT VDIVLNPLGV PSRMNVGQVL ETHLGAAAKG
LGERISRMLD EQRKVAELRK LLDEIYNHSD EVFKVDLDSL TDKEIFELCN NLRGGVPMAT
PVFDGAKEAE VKRMLELAGL DTTGQTKLYD GRTGDAFDRP VTVGYMYILK LNHLIDDKMH
ARSTGSYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAA YTLQEMLTVK SDDVNGRTKM
YKNIVDGDHR MEPGMPESFN VLVKEIRSLG IDIELESE
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