Gene Maqu_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0682 
Symbol 
ID4657509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp783490 
End bp784005 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID639810632 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_957967 
Protein GI120553616 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCGT TTGCCTACCG TTTGACCGGA ACCCGTCAGG ACGCTGAGGA TCTGGTGCAG 
GATGTGGTCG TCAAACTGTA TCCCCGATTA TCCGAACTGG AGACGGTGGA ACAGCTTCGA
CCCTGGCTGA ACCGTGTGCT TTATCGTCAG TTTGTGGATT CGATTCGCCG CAGGGGGCGC
CGTGCCGACC GGGCAGCCAG TGAACTCATG GAGGCGGACC ACCAGGCGGA TTGGTTCGAT
GCGCTGGAAT CTGATGATGC CACGCCAGAA CTTGTCTTCG ATCAGTCGCG CCTCGGCTTC
ATGCTGGACG AGGCTATGGA CCGGCTTTCG CCAGATCAGA GAACCTTGCT GCTTCTGCAT
GATGTTGACG GCTGGCGACA GGAGGATGTG GCCGAGGTAC TGGGTGTTGC GGTTGGTACC
GTGAAGTCGC GATTACATCG CAGCCGCGCC ACGTTGAGAA AATACCTGCA GCAGCGCATG
GAACCGGGAA GCGACGTCCG GCGTGTTGAG GAGTGA
 
Protein sequence
MYAFAYRLTG TRQDAEDLVQ DVVVKLYPRL SELETVEQLR PWLNRVLYRQ FVDSIRRRGR 
RADRAASELM EADHQADWFD ALESDDATPE LVFDQSRLGF MLDEAMDRLS PDQRTLLLLH
DVDGWRQEDV AEVLGVAVGT VKSRLHRSRA TLRKYLQQRM EPGSDVRRVE E