| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0552 |
|---|
| Symbol | |
|---|
| ID | 4654166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 623947 |
|---|
| End bp | 625671 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639810504 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_957840 |
|---|
| Protein GI | 120553489 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5519] Superfamily II helicase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATC AATTGAGAGA CTCAGGGCTG TACTGCTACA GCTCTGAAGA GTGGCAGAGG
GTTGGCGGGT GGATAGAGGT TGTTGCCCGA ACCCGCCTCT CCAATAAAAA ACACGGCCAC
GGTGCGCTGC TGCAGTGGAA AAATATGGAC AACGTCCTGC TCCGCGAGGT GGTGTATGCG
CGCAACCTGA ACGGCGATAA CGCCCGACAG ATACGGGAGC TGTTGGTGGA CACCGGCTAT
CCGCTCGAAC CCGGCAATAT TAGCTGGACA CGACTGCAGC GGTATTTGCT GGAGGAAATG
GCAAAGGCGC CTCCGGCCAC AACCGTCGAC CGCAGCGGCT GGCATGGGCC TATTTTCGCG
ACGAGCAGCT GGACGGCAGG TCAGGCGGAT GAGCAGCACC ACTTTGTAGG GCAGCTATCG
ACCTCACCGT TGCTCCAGGA AAGCGGGTCT CTTCAAGACT GGCAGAATCA AGTGGGGAAG
CTCTGTGGCG GCAACCCGCT GGCGATCCTC AGCGTCGGGG TGGCACTCGC GGCGCCCCTG
CTAAAGCATG CGGAGCTTGA AAATGGGGCC TTTCACTTGG TTGGTAATAG CTCCACCGGG
AAAACGACGT TGCTGCAGGT GGCCGCGAGT GTTTGTGGAG CACCAACGTT CGTGAGGAAC
TGGGTAGCGA CTGCCAATGG CTTGGCAGCC GTCGCTGCTG AGCACAACGA CATGTTGTTA
GCGTTGGACG AGATTGGCCT GGCTCGGCCG GAAGATGTCG ATGTGGCGAC GTATCACATA
ATGACCGGTG CCAGTAAGCT GCGCGCGAAT ATCTCAGGGG ATCTTGCTGA ACAAACGCAC
TGGCGAACGC TGGCGTTAAG TACTGGTGAG GTATGGCTGT CGGAAGTGTT TCAGGAAATA
GGAAAGTCGG TTAAAGCCGG CCAAGAGAAT CGTCTTGTCG AGATCCCCGT TTTTGGAAAA
TTTGGAGCCT TTGACGAGGT GCATGGCTTC AGCAGCCCCC AAGAGTTCGT GGACGCGTTG
AAAAGCCGCA CCAGGCACTA CCATGGCACG CTGTTCCGGC ACTGGCTTGA GCGTCTCACA
GAAGATGTGG ATGACTTGCC CGGCTATATC CAGAATGAGG TCGCCCGGTT GACGGACCAA
TGGAAGACCT CTCATATGGC TTCGCAAGTC CTCCGGGTGA TCAGGCGGTT CGCACTGATC
ACCGCTGCTC TGTGCCTAGC CTGCCGGAAC TACCTACTCC CCTGGTCGGA AGCGGAGTCA
GTTCGAGCGG TACACCAAGC AGTTGGAGCC TGGCTTCGGA GCCGAGGTCA CATCTTCAAT
TCGGAGGAGC ACCGCATTTT GGCTCGCCTT CGCGATGCGA TTTACAAATG GAATCACCGC
CTTGTTGACA TAGAGCGGGG GGATTACGGA AGAGCAATTG GTCTGCGACG CAAAGTGGCC
GGTGAGACGC AGTGGCTGAT ACCCAAAAAT ACTCTGATCA AGGAGCTTGG CCTTCGTAGT
CGATACACTC GGGAAATTGA GCCGCTTATC CAGAGAGATT TCATGGAAAC CAATGAGCAG
AGCCGTGGCA CCATGAAAAT CAAGCTGCGG GATCGATCGG AGCGTTTTTT CGCCCTGTGG
CCTGATCGCA TCAAGGCGTA TTGGGAAGCG CTACCGGATG GAGATGGACT TTCCCAGTTT
CCCACTATTC CCACTGGTGA TTCGGAGGTA GAGGAGGATG ATTGA
|
|---|
| Protein sequence | MKYQLRDSGL YCYSSEEWQR VGGWIEVVAR TRLSNKKHGH GALLQWKNMD NVLLREVVYA
RNLNGDNARQ IRELLVDTGY PLEPGNISWT RLQRYLLEEM AKAPPATTVD RSGWHGPIFA
TSSWTAGQAD EQHHFVGQLS TSPLLQESGS LQDWQNQVGK LCGGNPLAIL SVGVALAAPL
LKHAELENGA FHLVGNSSTG KTTLLQVAAS VCGAPTFVRN WVATANGLAA VAAEHNDMLL
ALDEIGLARP EDVDVATYHI MTGASKLRAN ISGDLAEQTH WRTLALSTGE VWLSEVFQEI
GKSVKAGQEN RLVEIPVFGK FGAFDEVHGF SSPQEFVDAL KSRTRHYHGT LFRHWLERLT
EDVDDLPGYI QNEVARLTDQ WKTSHMASQV LRVIRRFALI TAALCLACRN YLLPWSEAES
VRAVHQAVGA WLRSRGHIFN SEEHRILARL RDAIYKWNHR LVDIERGDYG RAIGLRRKVA
GETQWLIPKN TLIKELGLRS RYTREIEPLI QRDFMETNEQ SRGTMKIKLR DRSERFFALW
PDRIKAYWEA LPDGDGLSQF PTIPTGDSEV EEDD
|
|---|
| |