| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0454 |
|---|
| Symbol | |
|---|
| ID | 4657423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 518011 |
|---|
| End bp | 518916 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639810406 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_957742 |
|---|
| Protein GI | 120553391 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAC GCTGGCTGGA AGACTTTCTG GCGCTTGCCC GCACGCGCCA CTTCTCACGG
GCTGCCGAAC AGCAGCACGT GAGCCAGCCT ACGTTCAGCC GGCGCATCAA GCTGCTGGAG
GAATCCATGG GCACCACCCT GATCAATCGG CAGACTCTGC CATTGTCCCT GACCCCGGCC
GGAGAAGTGT TTCAGGAACT GTGTGAACGC ATCACCCGGG AGGTCCGGGA CACCCGGGAC
CGGATAGCCG CTCTGGATGC GGAAGCGTCT GCCCGCATCA GCGTTGGTTC TACCCAGGGG
CTGTTTTCGC ATTTCTATCA GGGTTGGGCG ACGGAGATGG GCATTGCCGA GCGCCTTCAA
CTGAACCTGA CCGCCACCAA CTGGGTGGGG GAGCAGTTTC TGGATGCCCT GGAAAGCGGC
GAATGTGACC TGGTGTTGTG TTACTGGCAC CCGGATTTGC CCTGGGGGGA TCGCCTGGCC
AGTGACAAGT TTCAGTGGCA GACCATCGGC AGGGAAGCAC TGGTGCCGGT CAGTATCGCC
AATGAGCAGG GCGAGCCCCG TTACCGGTTG CCGGGCACCA ATGAACAGCC TGTGCCTCTG
ATTGCCTACC ACAGCCGTGG TTTTTTGCAG TCGGCTATCG ACGGGCATCT GCAACGCGGC
AAGCTGCCGG CGAATCTTTT ACCACTGAAC GAGAATACCC AGTCCGCGAG CATCAAGGCC
CTGGTCAAAC AGGGCTTCGG CATGGGCTGG TTGCCCAAGC GGATGACGGA AAAAAGCGAA
CAGTTTGGGC GCCTGGTACG GGCTGGTGAT GAGCGCTGGG ACGTACCGCT GGAAATACGT
TTGATCCGCC TGAGTGACGC CCGCTCAGAC GACATACTGA ATCTCTGGAA ACAACTGGAA
ACCTGA
|
|---|
| Protein sequence | MEIRWLEDFL ALARTRHFSR AAEQQHVSQP TFSRRIKLLE ESMGTTLINR QTLPLSLTPA
GEVFQELCER ITREVRDTRD RIAALDAEAS ARISVGSTQG LFSHFYQGWA TEMGIAERLQ
LNLTATNWVG EQFLDALESG ECDLVLCYWH PDLPWGDRLA SDKFQWQTIG REALVPVSIA
NEQGEPRYRL PGTNEQPVPL IAYHSRGFLQ SAIDGHLQRG KLPANLLPLN ENTQSASIKA
LVKQGFGMGW LPKRMTEKSE QFGRLVRAGD ERWDVPLEIR LIRLSDARSD DILNLWKQLE
T
|
|---|
| |