| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0437 |
|---|
| Symbol | |
|---|
| ID | 4653842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 497361 |
|---|
| End bp | 498959 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639810388 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_957725 |
|---|
| Protein GI | 120553374 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.253187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGATT ACATTATTGT TGGCGCCGGG TCGGCTGGCT GTGTATTGGC TAACCGACTG
ACTGCCGATC CCTCGAAGCG AGTAGCGTTA CTTGAAGCAG GGCCAAAGGA TAAGAGCCCG
CTCATACATA TGCCTGTGGG TATTGCACTT CTTGCCAATA GCAAGCAGGT GAACTGGGCC
TTCGAAACCG AGCCTCAGGA ACATCTCAAG GGGCGCCGCC TGTTTTGGCC TCGTGGGAAA
ACACTTGGCG GGTCCTCTTC TATCAACGCC ATGGTCTATA TCAGAGGTCA CAAAGCCGAT
TATGACCACT GGGGTCAAGT TGCCGGGACA GACCTCTGGG GATGGGATCG CGCTTTAAAA
TTGTTTCGTC GACTGGAAGA TAATAAACGT TTTGGCGCAG ATTCTTACCA TGGGGAGGGC
GGTGAGCTCA CCGTAAGTGA ACTCAAATCA GTCAATCCGT TGAGTCGAGA TTTTGTTCGA
GCGGCACCTC ATGTAGAGCT CCCGATAAAC ACGGACTTTA ATGGAGAGAC GCAAGAGGGA
TTGGGACTCT ACCAGGTGAC ACAAAAAAAT GGTCGCCGTT GGAGTTCAGC GCAGGCATTT
CTGCGTGTCG CGGAGAACCG GCCTAATCTT GATGTGCTAA CGGACGCGCG GGTAACCCGG
GTGGTAATGG ACGGTAAGCG GGCAGTCGGC GTGACACTGA ACCAGGGGGG CGAATATCGC
CAGCTTAGAC TCAATAACGG CGGTGAAGTC ATATTGTCTG GTGGTGCGGT TAATTCACCA
CAACTACTTA TGCTTTCGGG AATCGGTGAT AGCGAAGAGC TTGGAAAACA CGGGATCCCC
CTTGTGCATC ATCTTCCTGA GGTCGGCCAG AATCTGGTTG ATCATTTGGA TATTACGATC
ATGCACGCGG CGAACTCACG TTTGCCCATT GGCGTTGCTC CCAGTTTCCT GTTTCGGGGC
GTGAGCGCAT TATTCTCATA TATCTTTGCG CGACGTGGAT TTCTTACCAG TAATGTTGCC
GAGTCCGGAG GCTTTGTTAA ATCCGAGCGC TCGTGCGAAC GGCCAAATGT GCAATTCCAC
TTTTTGCCAA CTTACCTGAA GGATCATGGA CGAAAAGTGA TGGCCGGGTA TGGGTACACC
TTGCATATTT GCGATCTAAT GCCCAGAAGC CGCGGTTTTA TTGGTCTCAA AAGCCCTGAC
CCATTGGCCG ACCCGTTGAT TCAACCCAAT TATCTCAGTA ACCCCGAAGA CATCAAAACA
ATGATCTCGG CCGTTAAATT TGGACGACGG ATACTCGGGG CACCAACAAT GACTTTACAT
AGTAAACGAG AAATTAAGCC CGGAAACTCG GTGTCTTCGG ACGGTCAGAT TGCGGACTTT
ATCCGGGAAA ATGCAGAGAC TATTTACCAC CCCGTTGGCA CTTGTCGTAT GGGCGCGGAT
CCGGATTCAG TCGTTGATCC GGAATTAAAA GTCAGAGGGA TTGAAGGGCT AAGAGTTGTC
GATGCCTCGA TAATGCCCAG TTTGGTTGCC GGTAACACCA ACGCACCCAC CATGATGATT
GCCGAAAATG CAGCCGACAT CCTCTTGGGA AATGTTTAG
|
|---|
| Protein sequence | MYDYIIVGAG SAGCVLANRL TADPSKRVAL LEAGPKDKSP LIHMPVGIAL LANSKQVNWA
FETEPQEHLK GRRLFWPRGK TLGGSSSINA MVYIRGHKAD YDHWGQVAGT DLWGWDRALK
LFRRLEDNKR FGADSYHGEG GELTVSELKS VNPLSRDFVR AAPHVELPIN TDFNGETQEG
LGLYQVTQKN GRRWSSAQAF LRVAENRPNL DVLTDARVTR VVMDGKRAVG VTLNQGGEYR
QLRLNNGGEV ILSGGAVNSP QLLMLSGIGD SEELGKHGIP LVHHLPEVGQ NLVDHLDITI
MHAANSRLPI GVAPSFLFRG VSALFSYIFA RRGFLTSNVA ESGGFVKSER SCERPNVQFH
FLPTYLKDHG RKVMAGYGYT LHICDLMPRS RGFIGLKSPD PLADPLIQPN YLSNPEDIKT
MISAVKFGRR ILGAPTMTLH SKREIKPGNS VSSDGQIADF IRENAETIYH PVGTCRMGAD
PDSVVDPELK VRGIEGLRVV DASIMPSLVA GNTNAPTMMI AENAADILLG NV
|
|---|
| |