Gene Maqu_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0347 
Symbol 
ID4657327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp400960 
End bp401820 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content60% 
IMG OID639810302 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_957639 
Protein GI120553288 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAGCT CGGTTAGCCG TTTCTCGCTG TGGCTGTTAT TGGCGCCTTT CCTGCTCTGG 
ATAGTGCTAT TGGTGCTGGT GCCCCATCTA CAGATGTTGC GGGTGTCGTT CCAGGTACGG
GAAAGCTGGG ATACCCTGGC CTGGGGGCTG GAGCAGTACC AGAATTTCTT CAGTGAATCC
TACTACTGGC GTACCTTCGT GCGTACCGGG CTCATGTCCC TGTTCACCAC CTTCCTCACC
CTGCTGATTG CCTTTCCCAT TGCCTGGTAC ATTGCCCGCC TGGCCCGTGG GAGGAGCAAG
GGTATTCTGT TCCTGGCTTG CCTGATCCCG TTCTGGGCCA GCGAGTTGGT GCGTACCTAC
GGCTGGATGA TCCTGTTGCG GGAGAGCGGC CTGTTCAGTT CCTGGCTGCA GGCGCTGGGC
TGGGTGGATG GCCCGGTGGA GATGCTCTAC AACGATGTCG CGGTGATCAT CGGCCTGGTC
TACAACGGCC TGCTGTTTAT GGTGGTGCCG CTGGTGACCA CGCTCGACGG CATGGACGAG
AACCTGGTCG AGGCCGGCTA CGATCTGGGT GGCGGCCACG GTACCGTGCT GCGGGAGGTA
GTGATTCCCT GGGCCATGCC GGGCATTGTC TCCGGCTGTA TTGTGGTGTT CATGCTCACC
CTGGGCAGTT ACCTCACGCC GATTCTGATG GGGGGCAAAG ACAGTGCCTG GTTTACTCAG
CAGATTTTCA CCCAGTTCAT CACCCGGTTT AACTGGGAGC AGGGGGCGGC TTTGGGGGTC
TTGCTACTGG TATTGTCGTC GCTGCTGGTC TGGCTGGGCC TGAAGCTGAC CGGGCAATCC
CTGCGCAAGG TTATGGGGTG A
 
Protein sequence
MNSSVSRFSL WLLLAPFLLW IVLLVLVPHL QMLRVSFQVR ESWDTLAWGL EQYQNFFSES 
YYWRTFVRTG LMSLFTTFLT LLIAFPIAWY IARLARGRSK GILFLACLIP FWASELVRTY
GWMILLRESG LFSSWLQALG WVDGPVEMLY NDVAVIIGLV YNGLLFMVVP LVTTLDGMDE
NLVEAGYDLG GGHGTVLREV VIPWAMPGIV SGCIVVFMLT LGSYLTPILM GGKDSAWFTQ
QIFTQFITRF NWEQGAALGV LLLVLSSLLV WLGLKLTGQS LRKVMG