Gene Maqu_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0343 
SymbolpotC 
ID4657323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp396831 
End bp397601 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content59% 
IMG OID639810298 
Productspermidine/putrescine ABC transporter membrane protein 
Protein accessionYP_957635 
Protein GI120553284 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCT GGCTGCCCCG CACCTACCTG ACGCTGGTGT ATCTGCTGCT GTACGTGCCT 
ATCGTGGTAC TCGTGGTGTT CTCCTTCAAC GATTCCCGCA CCGGTTACGA ATGGGGTGGC
CTGAGCCTGC GCTGGTACGA AGCCCTGTTG AACAACCGGG CCATGGTGCA GGCCATGTGG
AATTCCCTCT GGCTGGCGCT CTCCGCGGCC ACTGTGTCGA CGTTGATCGG CGCGCTCACC
GCACTGGCAC TGCACCGATA CCGGTTCCGG GGCAAGAAAG TACTCAATGG CATGCTGTTT
GTGGTGATGA TGTCGCCGGA AATTGTCCTG GCGATTTCGC TGCTGGCGCT GTTTCTGCTG
GTGGGGCTGC AGCTGGGGTA TGTATCCCTG TTGCTGGCCC ACGTTACCTT CTGCCTGCCG
TTTGTGGTCA TCACCGTGAT GGCCCGGCTC AGCGGGTTTG ACGAACGCCT GCCGGAGGCG
GCCCGGGATC TGGGCGCCAA CGATTTCACC ATGACCCGCA CGGTACTGAT TCCGGTGATC
ATGCCGGCCC TGCTGGCGGG CTGGCTGCTG GGGTTTACAC TGTCACTGGA CGACGTGGTG
GTCAGTACGT TTGTCAGTGG CCCGAGTTAT GAAATTCTGC CATTGCGCAT CTATTCGATG
GTGCGGGTGG GCCTGAAGCC CGAAGTGAAT GCCCTTGGCA CCCTGCTACT GGTATTCTCA
CTGGTCATGT TGATCTTGTC TCAATGGATA CTGTTAAGGA GCAAACGATG A
 
Protein sequence
MNRWLPRTYL TLVYLLLYVP IVVLVVFSFN DSRTGYEWGG LSLRWYEALL NNRAMVQAMW 
NSLWLALSAA TVSTLIGALT ALALHRYRFR GKKVLNGMLF VVMMSPEIVL AISLLALFLL
VGLQLGYVSL LLAHVTFCLP FVVITVMARL SGFDERLPEA ARDLGANDFT MTRTVLIPVI
MPALLAGWLL GFTLSLDDVV VSTFVSGPSY EILPLRIYSM VRVGLKPEVN ALGTLLLVFS
LVMLILSQWI LLRSKR