| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0287 |
|---|
| Symbol | |
|---|
| ID | 4654774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 331740 |
|---|
| End bp | 333287 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639810243 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_957580 |
|---|
| Protein GI | 120553229 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAA TCAGTAACAC CTTGCTCTGG CTGCTGGTCT CGGTGCTTGC CGCCAGGCTC
GGCCTGTCTG CCTTGTTGCC GTTCGCAGAC ACCACCGAAC CCCGCTACGC AGAGATGGCG
CGGATCATGG CGGAAACGGG TGACTGGATT ACGCCGTGGT TTGATATTGG CGTGCCGTTC
TGGGGCAAGC CGCCCCTGTC GTTCTGGTCC CAGGCGCTGT CGTTCAAGCT GTTTGGCGTC
AACGAATTCG CCGGCCGACT GCCGTCGTGG CTGGCCAACG TCGGCATCGT CTGGCTGGTA
TACAGCCTGC GGCGCTACCT GCATCCCGAC CCGCTCGGCC ACGGAGCCAA AACGCAAGGG
CTCTGGGCTG CGTTGATCTA CGCCACCACC GCACTGGGAT TTCTGTCTGC CGGCACGGTA
ATGACGGATT CGTTCCTGGC GCTTGGCACC AGCCTGACAC TGGTGAGCCT GGTCATTCGC
CTGCAAGGGG GCCCGCCGCT CTGGAGCTGG CTGTTCTTCA TCGGCCTGGC TATTGGTCTG
CTGGCCAAGG GCCCGCTGGT TCTGGTGCTG GCTGGCCTGC CGGTGTTCCT CTGGGCGCTC
ACCTTCAACC GTTGGCAGAC CCTCTGGCAC AGTTTGCCCT GGGTGCGCGG GCTGGCCCTG
ACCCTGTTGA TGTCAGCGCC CTGGTATGTC CTGGCAGAGC TGAAGACACC GGGTTTCCTG
GATTACTTCA TTGTCGGTGA GCACATCAAG CGCTTTGTCG TCAGCGGCTG GCAGGGTGAC
CTTTACGGCA GTGCCCACGA TTTCCCCCGG GGCACGATCT GGCTCTATCT TGTGCTTGCC
AGCATGCCCT GGGGGCTTGT CGCGGTGGCT GGCGTACTTC GCAACCACTG GTGCGGCGCC
TTCCAGCTGC AGCAATGGCA TACTGGCGAA CAACATGTCA GCGCGCTGGT ACTCCTGGCC
GCGGTGACAC CGGCCGTGTT CTTTACCCTG GCCGGTAACA TACTCTGGAC CTATGTGCTG
CCTGGTCTGC CATTTGTTGC CGCGCTCAGC TCCGGGCTAC TGATGCCAGA CATCGGCCGA
CGCTTGAAGC GTTCCTCAGT GGCCGCCACC CTTTTCATCC CCGTGCTTGG CTCACTTGCC
AGCGGCTGGG TGAGCCTTCA TCCGGAGCTG CTGAGAACGG AACGGGAGCT GGTGATGACC
GCCAGTCATC TGTCTGACAA GCCCTCTGCG AGGCTTGTTT ATACCGGCGA ACCTCCGTTT
TCTGCCCGGT TTTACAGCGC GGGTAGAGTT GATGGCATTG AGGTGGAAGC CCTCAGGCGC
GAACTCGCTG ATGGAAATCG AACGTTGCCC ATCGCTGTAG CGGTGGATAA AGATCAGCGG
GACTTGCTCG ACCAACTGGA GCAGATAGCC GATCCGGTCG ATCAAAACCG GCGTTACATT
CTGTTTCTGC TGGAACCGGT AACCAAGAGT GCAGCGTTGA GCAATGATTC CGGCCGCACT
CCGCCAGCTT TCAATTACAC TGAAGAGCAC AAACAACCTT TGAGTTGA
|
|---|
| Protein sequence | MTRISNTLLW LLVSVLAARL GLSALLPFAD TTEPRYAEMA RIMAETGDWI TPWFDIGVPF
WGKPPLSFWS QALSFKLFGV NEFAGRLPSW LANVGIVWLV YSLRRYLHPD PLGHGAKTQG
LWAALIYATT ALGFLSAGTV MTDSFLALGT SLTLVSLVIR LQGGPPLWSW LFFIGLAIGL
LAKGPLVLVL AGLPVFLWAL TFNRWQTLWH SLPWVRGLAL TLLMSAPWYV LAELKTPGFL
DYFIVGEHIK RFVVSGWQGD LYGSAHDFPR GTIWLYLVLA SMPWGLVAVA GVLRNHWCGA
FQLQQWHTGE QHVSALVLLA AVTPAVFFTL AGNILWTYVL PGLPFVAALS SGLLMPDIGR
RLKRSSVAAT LFIPVLGSLA SGWVSLHPEL LRTERELVMT ASHLSDKPSA RLVYTGEPPF
SARFYSAGRV DGIEVEALRR ELADGNRTLP IAVAVDKDQR DLLDQLEQIA DPVDQNRRYI
LFLLEPVTKS AALSNDSGRT PPAFNYTEEH KQPLS
|
|---|
| |